RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SIGLEC15Q6ZMC9 328 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 ZNF704Q6ZNC4 412 aaPredicted RBP4.25□□□□□ -1.73
CD44-202ENST00000278385 Q6ZPB1 254 aaPredicted RBP4.25□□□□□ -1.73
CD44-202ENST00000278385 DPPA4Q7L190 304 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 NDUFAF7Q7L592 441 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 DEFB128Q7Z7B8 93 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 PEG10Q86TG7 708 aaKnown RBP4.25□□□□□ -1.73
CD44-202ENST00000278385 NOXA1Q86UR1 476 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 VRK2Q86Y07 508 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 VSTM4Q8IW00 320 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 SLC35F3Q8IY50 421 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 GRHL3Q8TE85 626 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 ADAMTS14Q8WXS8 1223 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 GGHQ92820 318 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 SLCO2A1Q92959 643 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 MCHR2Q969V1 340 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 ERLEC1Q96DZ1 483 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 THOC1Q96FV9 657 aaKnown RBP4.25□□□□□ -1.73
CD44-202ENST00000278385 SFXN2Q96NB2 322 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 GUCD1Q96NT3 240 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 GPR78Q96P69 363 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 CASD1Q96PB1 797 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 CDX2Q99626 313 aaPredicted RBP4.25□□□□□ -1.73
CD44-202ENST00000278385 RBM4BQ9BQ04 359 aaKnown RBP4.25□□□□□ -1.73
CD44-202ENST00000278385 MXRA8Q9BRK3 442 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 C16orf70Q9BSU1 422 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 RBM4Q9BWF3 364 aaKnown RBP4.25□□□□□ -1.73
CD44-202ENST00000278385 ADGRE3Q9BY15 652 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 TM6SF1Q9BZW5 370 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 STRADBQ9C0K7 418 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 IL22Q9GZX6 179 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 ZDHHC6Q9H6R6 413 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 MAGIXQ9H6Y5 334 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 TBC1D17Q9HA65 648 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 PNO1Q9NRX1 252 aaKnown RBP4.25□□□□□ -1.73
CD44-202ENST00000278385 FKBP14Q9NWM8 211 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 SLC39A1Q9NY26 324 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 SLC2A8Q9NY64 477 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 HACD3Q9P035 362 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 PCDHA7Q9UN72 937 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 SATB2Q9UPW6 733 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 UBIAD1Q9Y5Z9 338 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 MYH8P13535 1937 aa4.25□□□□□ -1.73
CD44-202ENST00000278385 UMODL1Q5DID0 1318 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 ESYT2A0FGR8 921 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 CCDC162PA2VCL2 907 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 TUBAL3A6NHL2 446 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 HSPB2A8KAH6 182 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 PDZK1P1A8MUH7 402 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 FAM157AC9JC47 383 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 AP4M1O00189 453 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 SDHDO14521 159 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 CALUO43852 315 aaPredicted RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 PRAMEF2O60811 474 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 TM7SF2O76062 418 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 MOCS2O96007 188 aaPredicted RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 CALCAP01258 141 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 LGALS2P05162 132 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 CRYGBP07316 175 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 ZNF286BP0CG31 522 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 SAGP10523 405 aaPredicted RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 DBTP11182 482 aaKnown RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 CCL2P13500 99 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 ETFAP13804 333 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 AMD1P17707 334 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 NT5EP21589 574 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 PCMT1P22061 227 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 PROZP22891 400 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 MPZP25189 248 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 CD38P28907 300 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 GKP32189 559 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 STAT6P42226 847 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 CRATP43155 626 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 TNFRSF4P43489 277 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 CCL11P51671 97 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 STX17P56962 302 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 RGS8P57771 180 aaPredicted RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 TXNL4AP83876 142 aaKnown RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 RHAGQ02094 409 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 BDH1Q02338 343 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 CFHR1Q03591 330 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 DSC1Q08554 894 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 GAB1Q13480 694 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 ELAVL3Q14576 367 aaKnown RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 MELKQ14680 651 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 TRIP10Q15642 601 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 HSPB2Q16082 182 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 SNCBQ16143 134 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 RGS21Q2M5E4 152 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 CTU2Q2VPK5 515 aaKnown RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 AMZ1Q400G9 498 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 ZC2HC1CQ53FD0 456 aaPredicted RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 LACTB2Q53H82 288 aaPredicted RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 PAGE2BQ5JRK9 111 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 PDZK1Q5T2W1 519 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 NKAIN2Q5VXU1 208 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 TMEM268Q5VZI3 342 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 WSCD1Q658N2 575 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 PYHIN1Q6K0P9 492 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 SLC39A4Q6P5W5 647 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms