RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 DNAJB5O75953 348 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 FESP07332 822 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 ETS2P15036 469 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 RRM2P31350 389 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 HOXD12P35452 270 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 XCR1P46094 333 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 KCNAB1Q14722 419 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 GRM7Q14831 915 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 ZIK1Q3SY52 487 aaPredicted RBP20.67■□□□□ 0.9
CCDC7-201ENST00000277657 KRT80Q6KB66 452 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 PRSS42Q7Z5A4 293 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 KRT73Q86Y46 540 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 D2HGDHQ8N465 521 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 CCDC74AQ96AQ1 378 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 SLC41A2Q96JW4 573 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 BTBD2Q9BX70 525 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 TOR3AQ9H497 397 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 SOX17Q9H6I2 414 aaPredicted RBP20.67■□□□□ 0.9
CCDC7-201ENST00000277657 FSCN3Q9NQT6 498 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 PNPLA3Q9NST1 481 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 HCN3Q9P1Z3 774 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 LIPT1Q9Y234 373 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 ENPP4Q9Y6X5 453 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 CCDC88CQ9P219 2028 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 A0A0G2JPF8 293 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 A6NHS1 94 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 DUXAA6NLW8 204 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 HNRNPCL2B2RXH8 293 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 HNRNPCL3B7ZW38 293 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 SLC35E2P0CK97 266 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 HNRNPCL4P0DMR1 293 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 MGAT2Q10469 447 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 LAPTM4AQ15012 233 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 PRICKLE4Q2TBC4 344 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 TRMT12Q53H54 448 aaKnown RBP20.67■□□□□ 0.9
CCDC7-201ENST00000277657 CDC73Q6P1J9 531 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 DTWD2Q8NBA8 298 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 SIMC1Q8NDZ2 872 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 MBOAT4Q96T53 435 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 EXD2Q9NVH0 621 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 IRAK4Q9NWZ3 460 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 GIN1Q9NXP7 522 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 PDP2Q9P2J9 529 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 C3orf18Q9UK00 162 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 LYVE1Q9Y5Y7 322 aa20.67■□□□□ 0.9
CCDC7-201ENST00000277657 BDP1A6H8Y1 2624 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 LY6G6EA0A0G2JKS1 128 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 YKT6O15498 198 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 HS6ST1O60243 411 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 RFX4Q33E94 735 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 EXOSC6Q5RKV6 272 aaKnown RBP20.66■□□□□ 0.9
CCDC7-201ENST00000277657 KDM4DQ6B0I6 523 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 HEPHL1Q6MZM0 1159 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 KMT5CQ86Y97 462 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 CTHRC1Q96CG8 243 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 SLC35A4Q96G79 324 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 ZNF354BQ96LW1 612 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 TRNT1Q96Q11 434 aaKnown RBP20.66■□□□□ 0.9
CCDC7-201ENST00000277657 MAT2BQ9NZL9 334 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 PDP1Q9P0J1 537 aaPredicted RBP20.66■□□□□ 0.9
CCDC7-201ENST00000277657 SEC14L3Q9UDX4 400 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 U3KQA8 63 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 RP1P56715 2156 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 UNC13CQ8NB66 2214 aa20.66■□□□□ 0.9
CCDC7-201ENST00000277657 H0YIG0 161 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 SMNDC1O75940 238 aaKnown RBP eCLIP20.65■□□□□ 0.9
CCDC7-201ENST00000277657 AGR2O95994 175 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 IFNW1P05000 195 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 MSL3P1P0C860 447 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 AVPR1BP47901 424 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 SEPHS1P49903 392 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 SQSTM1Q13501 440 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 ZNF605Q86T29 641 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 CYP4Z1Q86W10 505 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 ZNF595Q8IYB9 648 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 SLC16A11Q8NCK7 471 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 ADAMTS15Q8TE58 950 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 PROX1Q92786 737 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 PEX11GQ96HA9 241 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 PIP5K1AQ99755 562 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 SPATA5L1Q9BVQ7 753 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 CAPN10Q9HC96 672 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 FAM118AQ9NWS6 357 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 MRPS33Q9Y291 106 aaKnown RBP20.65■□□□□ 0.9
CCDC7-201ENST00000277657 TESMINQ9Y4I5 508 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 DSPPQ9NZW4 1301 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 MYO15AQ9UKN7 3530 aa20.65■□□□□ 0.9
CCDC7-201ENST00000277657 MYOCOSA0A1B0GUC4 107 aa20.64■□□□□ 0.9
CCDC7-201ENST00000277657 PCDHGA12O60330 932 aa20.64■□□□□ 0.9
CCDC7-201ENST00000277657 NME6O75414 186 aaPredicted RBP20.64■□□□□ 0.9
CCDC7-201ENST00000277657 BMP10O95393 424 aa20.64■□□□□ 0.9
CCDC7-201ENST00000277657 H6PDO95479 791 aa20.64■□□□□ 0.9
CCDC7-201ENST00000277657 CLIC3O95833 236 aa20.64■□□□□ 0.9
CCDC7-201ENST00000277657 RHCEP18577 417 aa20.64■□□□□ 0.9
CCDC7-201ENST00000277657 NT5EP21589 574 aa20.64■□□□□ 0.9
CCDC7-201ENST00000277657 CNR2P34972 360 aa20.64■□□□□ 0.9
CCDC7-201ENST00000277657 DAPP51397 102 aa20.64■□□□□ 0.9
CCDC7-201ENST00000277657 IGLV3-21P80748 117 aaPredicted RBP20.64■□□□□ 0.9
CCDC7-201ENST00000277657 MAT1AQ00266 395 aaKnown RBP20.64■□□□□ 0.9
CCDC7-201ENST00000277657 NR0B2Q15466 257 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms