RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 RBFOX1Q9NWB1 397 aaKnown RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 WSB2Q9NYS7 404 aaPredicted RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 PTTG3PQ9NZH4 202 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 SERGEFQ9UGK8 458 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 MGAT4BQ9UQ53 548 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 FCF1Q9Y324 198 aaKnown RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 TNRC6BQ9UPQ9 1833 aaKnown RBP9.77□□□□□ -0.84
UPF3B-201ENST00000276201 GLYATL1P3A0A0U1RQE8 302 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 A0A0X1KG70 313 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 IRGMA1A4Y4 181 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 LINC00862A6NCI5 91 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 OR5K3A6NET4 321 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 FABP12A6NFH5 140 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 PRAMEF25A6NGN4 478 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 A8MV72 311 aaPredicted RBP9.77□□□□□ -0.85
UPF3B-201ENST00000276201 TLR4O00206 839 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 RGS5O15539 181 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 BNIP3LO60238 219 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 PRAMEF4O60810 478 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 SOCS5O75159 536 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 TRBC1P01850 177 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 GSTM1P09488 218 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 OSMP13725 252 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 RPL3P39023 403 aaKnown RBP9.77□□□□□ -0.85
UPF3B-201ENST00000276201 MAP2K3P46734 347 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 DHPSP49366 369 aaPredicted RBP9.77□□□□□ -0.85
UPF3B-201ENST00000276201 METAP1P53582 386 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 C1DQ13901 141 aaKnown RBP9.77□□□□□ -0.85
UPF3B-201ENST00000276201 DOC2BQ14184 412 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.77□□□□□ -0.852e-7■■□□□ 13.1
UPF3B-201ENST00000276201 PDZK1Q5T2W1 519 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 MFSD4BQ5TF39 518 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 PRAMEF9Q5VWM5 478 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 UBE2R2Q712K3 238 aaPredicted RBP9.77□□□□□ -0.85
UPF3B-201ENST00000276201 ARMCX6Q7L4S7 300 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 PHC2Q8IXK0 858 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 ELMOD2Q8IZ81 293 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 NAGSQ8N159 534 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 CADM2Q8N3J6 435 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 YIPF7Q8N8F6 280 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 ENKURQ8TC29 256 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 DEDD2Q8WXF8 326 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 OR8D1Q8WZ84 308 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 MARVELD1Q9BSK0 173 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 ING3Q9NXR8 418 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 CRLS1Q9UJA2 301 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 DIMT1Q9UNQ2 313 aaKnown RBP9.77□□□□□ -0.85
UPF3B-201ENST00000276201 ZNF451Q9Y4E5 1061 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 NUMA1Q14980 2115 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 GABRR3A8MPY1 467 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 SGK494L7N484 410 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 ADH1BP00325 375 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 CTSLP07711 333 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 ARAFP10398 606 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 CYP4F2P78329 520 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 RAE1P78406 368 aaKnown RBP9.77□□□□□ -0.85
UPF3B-201ENST00000276201 HSPA14Q0VDF9 509 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 GAB1Q13480 694 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 SCARB2Q14108 478 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 SPIN4Q56A73 249 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 GRHL2Q6ISB3 625 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 PLET1Q6UQ28 207 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 MBOAT1Q6ZNC8 495 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 HDDC2Q7Z4H3 204 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 CHST14Q8NCH0 376 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 DNAJA4Q8WW22 397 aaPredicted RBP9.77□□□□□ -0.85
UPF3B-201ENST00000276201 SH3KBP1Q96B97 665 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 ARRDC1-AS1Q9H2J1 176 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 ANKRA2Q9H9E1 313 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 ABCB9Q9NP78 766 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 TIGARQ9NQ88 270 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 C1GALT1Q9NS00 363 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 SNTG1Q9NSN8 517 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 GIMAP4Q9NUV9 329 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 TXNL4BQ9NX01 149 aaKnown RBP9.77□□□□□ -0.85
UPF3B-201ENST00000276201 TOR4AQ9NXH8 423 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 TAS2R16Q9NYV7 291 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 REV1Q9UBZ9 1251 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 NUP50Q9UKX7 468 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 SCML1Q9UN30 329 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 RNF215Q9Y6U7 377 aa9.77□□□□□ -0.85
UPF3B-201ENST00000276201 A0A1W2PP55 124 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 OR6C70A6NIJ9 312 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 KPNA5O15131 536 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 GPR39O43194 453 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 PCDH7O60245 1069 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 ENTPD6O75354 484 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 GADD45GO95257 159 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 HIST1H2AGP0C0S8 130 aaPredicted RBP9.76□□□□□ -0.85
UPF3B-201ENST00000276201 MSL3P1P0C860 447 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 BPIP17213 487 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 HIST1H2ADP20671 130 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 FGF9P31371 208 aaPredicted RBP9.76□□□□□ -0.85
UPF3B-201ENST00000276201 ACSL1P33121 698 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 SDC2P34741 201 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 DRD3P35462 400 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 ACSM2AQ08AH3 577 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 SPEM2Q0P670 501 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 TPBGQ13641 420 aa9.76□□□□□ -0.85
UPF3B-201ENST00000276201 TAB1Q15750 504 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms