RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 DUSP23Q9BVJ7 150 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 TOR3AQ9H497 397 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 KCNE3Q9Y6H6 103 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 SLC28A2O43868 658 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 CDC123O75794 336 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-201ENST00000254816 PORP16435 677 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-201ENST00000254816 SOX18P35713 384 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 PRR5P85299 388 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 NDUFA9Q16795 377 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 CRB2Q5IJ48 1285 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 TMPRSS9Q7Z410 1059 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 OR56A1Q8NGH5 318 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 SPPL2AQ8TCT8 520 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 POP5Q969H6 163 aaKnown RBP17.72■□□□□ 0.43
TRIM47-201ENST00000254816 SMOC1Q9H4F8 434 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 C3orf14Q9HBI5 128 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 TMEM184BQ9Y519 407 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-201ENST00000254816 TMEM150CB9EJG8 249 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 H0YAE9 185 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 ESRRGP62508 458 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 HSD11B2P80365 405 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 PMS2P3Q13401 168 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 TRIM61Q5EBN2 209 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 PRAMEF17Q5VTA0 474 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 SDCCAG3Q96C92 435 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 RNF31Q96EP0 1072 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 MMABQ96EY8 250 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-201ENST00000254816 C7orf34Q96L11 122 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 RSPO3Q9BXY4 272 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-201ENST00000254816 CAPN10Q9HC96 672 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 CDC14AQ9UNH5 594 aa17.72■□□□□ 0.43
TRIM47-201ENST00000254816 MN1Q10571 1320 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-201ENST00000254816 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 OR2W5A6NFC9 320 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 GPR75O95800 540 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 PRKACGP22612 351 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 KHKP50053 298 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 LAPTM4AQ15012 233 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 NR0B2Q15466 257 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 TRMT12Q53H54 448 aaKnown RBP17.71■□□□□ 0.43
TRIM47-201ENST00000254816 BHLHB9Q6PI77 547 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 ANKRD9Q96BM1 317 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-201ENST00000254816 MOAP1Q96BY2 351 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 GIMAP5Q96F15 307 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 RUBCNLQ9H714 662 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 IFT80Q9P2H3 777 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-201ENST00000254816 P2RX2Q9UBL9 471 aa17.71■□□□□ 0.43
TRIM47-201ENST00000254816 PRAMEF25A6NGN4 478 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 E2F6O75461 281 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 FOLR1P15328 257 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 FUT5Q11128 374 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 ZBED5Q49AG3 693 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 IQCCQ4KMZ1 466 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 TCTE1Q5JU00 501 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 TSEN54Q7Z6J9 526 aaKnown RBP17.7■□□□□ 0.42
TRIM47-201ENST00000254816 HMGN2P46Q86SG4 172 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 SAMD14Q8IZD0 417 aaPredicted RBP17.7■□□□□ 0.42
TRIM47-201ENST00000254816 TANKQ92844 425 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 OR7D2Q96RA2 312 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 MBOAT4Q96T53 435 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 POLR1BQ9H9Y6 1135 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 GMEB2Q9UKD1 530 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 MAU2Q9Y6X3 613 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 NSA2O95478 260 aaKnown RBP17.7■□□□□ 0.42
TRIM47-201ENST00000254816 SP9P0CG40 484 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 NR2F1P10589 423 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 NT5EP21589 574 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 FAM53BQ14153 422 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 NEDD8Q15843 81 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 DUSP7Q16829 419 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 ZNF628Q5EBL2 1059 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 AP1ARQ63HQ0 302 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 OR2T5Q6IEZ7 315 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 KCTD8Q6ZWB6 473 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 SLC30A8Q8IWU4 369 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 OR2T29Q8NH02 315 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 ISOC1Q96CN7 298 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 BARD1Q99728 777 aaKnown RBP17.7■□□□□ 0.42
TRIM47-201ENST00000254816 CHRNA10Q9GZZ6 450 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 ING2Q9H160 280 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 PRDM9Q9NQV7 894 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 BAG5Q9UL15 447 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 WDR87Q6ZQQ6 2873 aa17.7■□□□□ 0.42
TRIM47-201ENST00000254816 OR2B3O76000 313 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 PIGAP37287 484 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 DCTP40126 519 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 WDR74Q6RFH5 385 aaPredicted RBP17.69■□□□□ 0.42
TRIM47-201ENST00000254816 DGAT2L6Q6ZPD8 337 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 OR1L3Q8NH93 324 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 TREX2Q9BQ50 279 aaPredicted RBP17.69■□□□□ 0.42
TRIM47-201ENST00000254816 GTPBP2Q9BX10 602 aaKnown RBP17.69■□□□□ 0.42
TRIM47-201ENST00000254816 AMBRA1Q9C0C7 1298 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 SH3GLB1Q9Y371 365 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 FITM1A5D6W6 292 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 H3BMH7 237 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 PCDHGA12O60330 932 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 CT62P0C5K7 136 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 RNH1P13489 461 aaKnown RBP17.69■□□□□ 0.42
TRIM47-201ENST00000254816 IL7RP16871 459 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 EEF1B2P24534 225 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms