RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 RBMS1P29558 406 aaKnown RBP12.09□□□□□ -0.47
LSM8-201ENST00000249299 SLC5A2P31639 672 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 MC3RP41968 323 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 EMP2P54851 167 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 ELOAQ14241 798 aaKnown RBP12.09□□□□□ -0.47
LSM8-201ENST00000249299 ERV3-1Q14264 604 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 GNA13Q14344 377 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 ZNF630Q2M218 657 aaPredicted RBP12.09□□□□□ -0.47
LSM8-201ENST00000249299 C3orf38Q5JPI3 329 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 EXOSC6Q5RKV6 272 aaKnown RBP12.09□□□□□ -0.47
LSM8-201ENST00000249299 PRAMEF8Q5VWM4 474 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 PRAMEF7Q5VXH5 474 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 AP1ARQ63HQ0 302 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 FAM180BQ6P0A1 224 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 TMEM205Q6UW68 189 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 TMEM107Q6UX40 140 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 HPS6Q86YV9 775 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 LGI4Q8N135 537 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 CDRT4Q8N9R6 151 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 GALNT6Q8NCL4 622 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 C11orf65Q8NCR3 313 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 MORN4Q8NDC4 146 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 FAM13CQ8NE31 585 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 NUP43Q8NFH3 380 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 OR10A6Q8NH74 314 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 JADE3Q92613 823 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 PMM1Q92871 262 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 AURKBQ96GD4 344 aaPredicted RBP12.09□□□□□ -0.47
LSM8-201ENST00000249299 FBXL20Q96IG2 436 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 VPS50Q96JG6 964 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 ACTRT3Q9BYD9 372 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 TRIM15Q9C019 465 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 IKZF5Q9H5V7 419 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 GORASP2Q9H8Y8 452 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 PRODH2Q9UF12 536 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 C3orf18Q9UK00 162 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 FAF1Q9UNN5 650 aaPredicted RBP12.09□□□□□ -0.47
LSM8-201ENST00000249299 LIPT1Q9Y234 373 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 RRP15Q9Y3B9 282 aaKnown RBP12.09□□□□□ -0.47
LSM8-201ENST00000249299 TMEM247A6NEH6 219 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 CDRT15L2A8MXV6 281 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 PRAMEF2O60811 474 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 ALOX12BO75342 701 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 AK1P00568 194 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 IFNA16P05015 189 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 HMGN2P05204 90 aaKnown RBP12.08□□□□□ -0.48
LSM8-201ENST00000249299 S1PR1P21453 382 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 SOX18P35713 384 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 CRATP43155 626 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 KHKP50053 298 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 ACTR3P61158 418 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 ID2Q02363 134 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 RTP5Q14D33 572 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 CYP51A1Q16850 503 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 VMACQ2NL98 169 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 INTS11Q5TA45 600 aaKnown RBP12.08□□□□□ -0.48
LSM8-201ENST00000249299 MFSD4BQ5TF39 518 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 C1orf146Q5VVC0 180 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 MLIPQ5VWP3 458 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 CDC73Q6P1J9 531 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 RNF130Q86XS8 419 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 MICU2Q8IYU8 434 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 NLGN4XQ8N0W4 816 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 NLGN4YQ8NFZ3 816 aaPredicted RBP12.08□□□□□ -0.48
LSM8-201ENST00000249299 OR7G2Q8NG99 324 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 CLPTM1LQ96KA5 538 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 SLC35G5Q96KT7 338 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 STACQ99469 402 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 CRB3Q9BUF7 120 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 RBCK1Q9BYM8 510 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 A4GALTQ9NPC4 353 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 DUSP22Q9NRW4 184 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 DLL3Q9NYJ7 618 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 SNX13Q9Y5W8 968 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 CLCA3PQ9Y6N3 262 aa12.08□□□□□ -0.48
LSM8-201ENST00000249299 CEP250Q9BV73 2442 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 LOC102723996A0A087X1L8 192 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 A0A1W2PS29 197 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 AQP12BA6NM10 295 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 OR6C76A6NM76 312 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 H0YHG0 523 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 KLF7O75840 302 aaPredicted RBP12.07□□□□□ -0.48
LSM8-201ENST00000249299 PDE5AO76074 875 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 CBX7O95931 251 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 MATN1P21941 496 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 PCGF2P35227 344 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 MAP3K8P41279 467 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 MAN2A2P49641 1150 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 DSTNP60981 165 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 DCAF7P61962 342 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 RPS15P62841 145 aaKnown RBP12.07□□□□□ -0.48
LSM8-201ENST00000249299 GABREP78334 506 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 SELPLGQ14242 412 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 LTB4RQ15722 352 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 ADRM1Q16186 407 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 RSPO4Q2I0M5 234 aaPredicted RBP12.07□□□□□ -0.48
LSM8-201ENST00000249299 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.07□□□□□ -0.48
LSM8-201ENST00000249299 GCNT6Q5T4J0 391 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 LCN8Q6JVE9 175 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms