RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SYNPOQ8N3V7 929 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 SPICQ8N5J4 248 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 OR9Q2Q8NGE9 314 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 OR10K1Q8NGX5 313 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 OR52J3Q8NH60 311 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 RPF1Q9H9Y2 349 aaKnown RBP12.35□□□□□ -0.43
MSH2-201ENST00000233146 BEX1Q9HBH7 125 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 DNAJC27Q9NZQ0 273 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 ASH2LQ9UBL3 628 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 RPL36Q9Y3U8 105 aaKnown RBP12.35□□□□□ -0.43
MSH2-201ENST00000233146 PTCH2Q9Y6C5 1203 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 SHISA3A0PJX4 238 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 OR2M5A3KFT3 312 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 OR2W5A6NFC9 320 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 HMSDA8MTL9 139 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 SLC28A2O43868 658 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 HOXC4P09017 264 aaPredicted RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 COX5BP10606 129 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 CRISP1P54107 249 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 RAP2BP61225 183 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 MAD2L1Q13257 205 aaPredicted RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 MINDY4Q4G0A6 757 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 MANEAQ5SRI9 462 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 PRAMEF18Q5VWM3 479 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 NUDT18Q6ZVK8 323 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 ANKRD46Q86W74 232 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 OR5M3Q8NGP4 307 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 THAP6Q8TBB0 222 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 ADAT1Q9BUB4 502 aaKnown RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 COA1Q9GZY4 146 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 TRDV1A0A1B0GX56 115 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 TMEM200CA6NKL6 621 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 RHPN2P1A8MT19 583 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 LILRB5O75023 590 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 B3GALT4O96024 378 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 TYRP14679 529 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 GABRA5P31644 462 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 STARD6P59095 220 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 ZNF33AQ06730 810 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 C9orf131Q5VYM1 1079 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 PAQR3Q6TCH7 311 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 TSPAN33Q86UF1 283 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 NAA40Q86UY6 237 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 ASZ1Q8WWH4 475 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 NDRG1Q92597 394 aaKnown RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 PAWRQ96IZ0 340 aaKnown RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 ARL6Q9H0F7 186 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 RNF122Q9H9V4 155 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 NRBP2Q9NSY0 501 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 METTL1Q9UBP6 276 aaKnown RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 UBQLN1Q9UMX0 589 aaKnown RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 CBY1Q9Y3M2 126 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 NME7Q9Y5B8 376 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 GBF1Q92538 1859 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 TMEM218A2RU14 115 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 GABRDO14764 452 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 CDC123O75794 336 aaPredicted RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 ETV5P41161 510 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 PITPNBP48739 271 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 CASP6P55212 293 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 RAB33AQ14088 237 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 ZC3H14Q6PJT7 736 aaKnown RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 UQCC3Q6UW78 93 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 LRRN1Q6UXK5 716 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 LRRC28Q86X40 367 aaPredicted RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 CDAN1Q8IWY9 1227 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 CRYBG2Q8N1P7 616 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 RELL2Q8NC24 303 aaPredicted RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 ACOT12Q8WYK0 555 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 TDRD3Q9H7E2 651 aaKnown RBP12.34□□□□□ -0.43
MSH2-201ENST00000233146 MINDY3Q9H8M7 445 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 PXMP2Q9NR77 195 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 POLLQ9UGP5 575 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 IRAK3Q9Y616 596 aa12.34□□□□□ -0.43
MSH2-201ENST00000233146 KIAA1217Q5T5P2 1943 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 TXNL1O43396 289 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 OR2A4O95047 310 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 SDHBP21912 280 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 RBMS1P29558 406 aaKnown RBP12.33□□□□□ -0.44
MSH2-201ENST00000233146 GCGRP47871 477 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 PCP4P48539 62 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 SIM1P81133 766 aaPredicted RBP12.33□□□□□ -0.44
MSH2-201ENST00000233146 MELKQ14680 651 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 FAM196AQ6ZSG2 479 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 SIAH3Q8IW03 269 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 DBF4BQ8NFT6 615 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 AKR7LQ8NHP1 331 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 GTPBP3Q969Y2 492 aaKnown RBP12.33□□□□□ -0.44
MSH2-201ENST00000233146 TADA1Q96BN2 335 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 OR2A7Q96R45 310 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 ABHD1Q96SE0 405 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 TSSK6Q9BXA6 273 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 ZCCHC2Q9C0B9 1178 aaKnown RBP12.33□□□□□ -0.44
MSH2-201ENST00000233146 JPH1Q9HDC5 661 aaPredicted RBP12.33□□□□□ -0.44
MSH2-201ENST00000233146 ASIC5Q9NY37 505 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 MGAT4CQ9UBM8 478 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 ACSL6Q9UKU0 697 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 NPEPPSL1A6NEC2 478 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 WASH3PC4AMC7 463 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 SUV39H1O43463 412 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms