RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 CA13Q8N1Q1 262 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 FAM181AQ8N9Y4 354 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 ICA1LQ8NDH6 482 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 OR5T3Q8NGG3 340 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 OR56A1Q8NGH5 318 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 ADAMTS18Q8TE60 1221 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 LRTOMTQ8WZ04 291 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 TANKQ92844 425 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 NEURL3Q96EH8 262 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 CNRIP1Q96F85 164 aaPredicted RBP9.15□□□□□ -0.94
TTC1-201ENST00000231238 SLC47A1Q96FL8 570 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 GFM1Q96RP9 751 aaKnown RBP9.15□□□□□ -0.94
TTC1-201ENST00000231238 CSF3RQ99062 836 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 PKP2Q99959 881 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 DPYSL5Q9BPU6 564 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 KLHL4Q9C0H6 718 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 CHRNA10Q9GZZ6 450 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 SPRTNQ9H040 489 aaPredicted RBP9.15□□□□□ -0.94
TTC1-201ENST00000231238 SEMA6AQ9H2E6 1030 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 SLAMF7Q9NQ25 335 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 CCM2LQ9NUG4 571 aaPredicted RBP9.15□□□□□ -0.94
TTC1-201ENST00000231238 DDX18Q9NVP1 670 aaKnown RBP9.15□□□□□ -0.94
TTC1-201ENST00000231238 THUMPD1Q9NXG2 353 aaKnown RBP9.15□□□□□ -0.94
TTC1-201ENST00000231238 TMEM9Q9P0T7 183 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 CDC14AQ9UNH5 594 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 DTNAQ9Y4J8 743 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 PCDHGA5Q9Y5G8 931 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 MDC1Q14676 2089 aaKnown RBP9.15□□□□□ -0.94
TTC1-201ENST00000231238 MN1Q10571 1320 aaPredicted RBP9.15□□□□□ -0.94
TTC1-201ENST00000231238 CACNA1EQ15878 2313 aa9.15□□□□□ -0.94
TTC1-201ENST00000231238 TP53BP1Q12888 1972 aaPredicted RBP9.15□□□□□ -0.95
TTC1-201ENST00000231238 EME2A4GXA9 379 aaPredicted RBP9.15□□□□□ -0.95
TTC1-201ENST00000231238 MYO1GB0I1T2 1018 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 EMC8O43402 210 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 PCDHGA12O60330 932 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 PRKD3O94806 890 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 NSA2O95478 260 aaKnown RBP9.15□□□□□ -0.95
TTC1-201ENST00000231238 LDLRP01130 860 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 FHP07954 510 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 RAP2AP10114 183 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 HOXB6P17509 224 aaKnown RBP9.15□□□□□ -0.95
TTC1-201ENST00000231238 NELFEP18615 380 aaKnown RBP9.15□□□□□ -0.95
TTC1-201ENST00000231238 SPINK2P20155 84 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 PTGER1P34995 402 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 PCGF2P35227 344 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 FRKP42685 505 aaPredicted RBP9.15□□□□□ -0.95
TTC1-201ENST00000231238 GRK6P43250 576 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 RPS26P62854 115 aaKnown RBP9.15□□□□□ -0.95
TTC1-201ENST00000231238 CDK6Q00534 326 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 ACY1Q03154 408 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 VEZF1Q14119 521 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 FAM53BQ14153 422 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 TAF11Q15544 211 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 ZNF750Q32MQ0 723 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 LPCAT4Q643R3 524 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 TLDC1Q6P9B6 456 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 TTLL10Q6ZVT0 673 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 AMIGO2Q86SJ2 522 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 PDSS2Q86YH6 399 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 ADGRG5Q8IZF4 528 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 OR9A2Q8NGT5 310 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 NFKBIDQ8NI38 313 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 SFXN5Q8TD22 340 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 NETO1Q8TDF5 533 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 DNAJC9Q8WXX5 260 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 LZICQ8WZA0 190 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 MAL2Q969L2 176 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 SDCCAG3Q96C92 435 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 DUS3LQ96G46 650 aaKnown RBP9.15□□□□□ -0.95
TTC1-201ENST00000231238 PEX11GQ96HA9 241 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 TPD52L3Q96J77 140 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 VPS50Q96JG6 964 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 LRRN3Q9H3W5 708 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 CACYBPQ9HB71 228 aaKnown RBP9.15□□□□□ -0.95
TTC1-201ENST00000231238 EQTNQ9NQ60 294 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 FGF21Q9NSA1 209 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 CUTCQ9NTM9 273 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 ARMC1Q9NVT9 282 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 KCMF1Q9P0J7 381 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 CES1P1Q9UKY3 287 aa9.15□□□□□ -0.95
TTC1-201ENST00000231238 CABIN1Q9Y6J0 2220 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 COL6A3P12111 3177 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 TCRBV5S2A0A599 114 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 BLACEA4D250 179 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 TOX3O15405 576 aaPredicted RBP9.14□□□□□ -0.95
TTC1-201ENST00000231238 SUV39H1O43463 412 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 SLC28A2O43868 658 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 B4GALT2O60909 372 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 LDB3O75112 727 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 LDOC1O95751 146 aaPredicted RBP9.14□□□□□ -0.95
TTC1-201ENST00000231238 GPR75O95800 540 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 MT-ND1P03886 318 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 NR2F1P10589 423 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 CKMT1AP12532 417 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 CPMP14384 443 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 MATN1P21941 496 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 PEX2P28328 305 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 KDELR2P33947 212 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 NTF4P34130 210 aa9.14□□□□□ -0.95
TTC1-201ENST00000231238 GCKP35557 465 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms