RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 NUDT6P53370 316 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 VSX2P58304 361 aaPredicted RBP12.93□□□□□ -0.34
GABPB1-201ENST00000220429 FOXK2Q01167 660 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 MXD1Q05195 221 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 SIGLEC14Q08ET2 396 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 NPRL3Q12980 569 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 ALKBH1Q13686 389 aaKnown RBP12.93□□□□□ -0.34
GABPB1-201ENST00000220429 ERV3-1Q14264 604 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 CARD16Q5EG05 197 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 CD276Q5ZPR3 534 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 DCAF4L2Q8NA75 395 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 CAMKVQ8NCB2 501 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 PIH1D2Q8WWB5 315 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 ESAMQ96AP7 390 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 SCRN2Q96FV2 425 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 P2RY12Q9H244 342 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 TAS2R16Q9NYV7 291 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 PCTPQ9UKL6 214 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 TBX21Q9UL17 535 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 ZNF451Q9Y4E5 1061 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 ASB1Q9Y576 335 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 PCDHGA6Q9Y5G7 932 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 ZNF106Q9H2Y7 1883 aaKnown RBP12.92□□□□□ -0.34
GABPB1-201ENST00000220429 A0A1B0GVI7 797 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 ZNF670-ZNF695F2Z2N8 137 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 OR4F21O95013 312 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 ESR1P03372 595 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 CCL5P13501 91 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 C4BPBP20851 252 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 FPR3P25089 353 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 EIF2S3P41091 472 aaKnown RBP12.92□□□□□ -0.34
GABPB1-201ENST00000220429 PTGER3P43115 390 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 IL2P60568 153 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 EIF4HQ15056 248 aaKnown RBP12.92□□□□□ -0.34
GABPB1-201ENST00000220429 EIF2S3LQ2VIR3 472 aaKnown RBP12.92□□□□□ -0.34
GABPB1-201ENST00000220429 ZNF648Q5T619 568 aaPredicted RBP12.92□□□□□ -0.34
GABPB1-201ENST00000220429 OR4F3Q6IEY1 312 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 FTMTQ8N4E7 242 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 UXS1Q8NBZ7 420 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 TMEM43Q9BTV4 400 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 TAPBPLQ9BX59 468 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 SARS2Q9NP81 518 aaKnown RBP12.92□□□□□ -0.34
GABPB1-201ENST00000220429 POMT2Q9UKY4 750 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 SSR3Q9UNL2 185 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 C7orf66A4D0T2 115 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 MYO1GB0I1T2 1018 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 CXCR6O00574 342 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 PVALBP20472 110 aaPredicted RBP12.92□□□□□ -0.34
GABPB1-201ENST00000220429 VEGFCP49767 419 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 KIAA1024LP59773 190 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 CACNG1Q06432 222 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 SNTB1Q13884 538 aaKnown RBP12.92□□□□□ -0.34
GABPB1-201ENST00000220429 GTF2H3Q13889 308 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 TEX30Q5JUR7 227 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 ARMC12Q5T9G4 340 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 HSDL2Q6YN16 418 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 GDPGP1Q6ZNW5 385 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 SPATA19Q7Z5L4 167 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 DPP10Q8N608 796 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 ZNF454Q8N9F8 522 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 SLC25A46Q96AG3 418 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 KCNJ15Q99712 375 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 B3GAT2Q9NPZ5 323 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 AIG1Q9NVV5 245 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 SPG21Q9NZD8 308 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 NDUFAF4Q9P032 175 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 ATXN7L1Q9ULK2 861 aaPredicted RBP12.92□□□□□ -0.34
GABPB1-201ENST00000220429 CLEC4EQ9ULY5 219 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 CBY1Q9Y3M2 126 aa12.92□□□□□ -0.34
GABPB1-201ENST00000220429 D6RAR5 112 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 GADD45GO95257 159 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 LGI1O95970 557 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 HEXBP07686 556 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 GKP32189 559 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 SPAM1P38567 509 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 AP1S1P61966 158 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 DEFA6Q01524 100 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 KLHL26Q53HC5 615 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 GAREM2Q75VX8 874 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 GPSM1Q86YR5 675 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 ZNF548Q8NEK5 533 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-201ENST00000220429 C9orf43Q8TAL5 461 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-201ENST00000220429 ASZ1Q8WWH4 475 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 SCMH1Q96GD3 660 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 HRASLS5Q96KN8 279 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 PFDN5Q99471 154 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 HTATIP2Q9BUP3 242 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 MRPL17Q9NRX2 175 aaKnown RBP12.91□□□□□ -0.34
GABPB1-201ENST00000220429 DCAF13Q9NV06 445 aaKnown RBP12.91□□□□□ -0.34
GABPB1-201ENST00000220429 PDP1Q9P0J1 537 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-201ENST00000220429 FAM234BA2RU67 622 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 SLC9B1P1A6NJY1 282 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 NRG2O14511 850 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-201ENST00000220429 GAPDHSO14556 408 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-201ENST00000220429 SCELO95171 688 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 GABRR2P28476 465 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 PIK3CGP48736 1102 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 GPR143P51810 404 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 CHAF1BQ13112 559 aa12.91□□□□□ -0.34
GABPB1-201ENST00000220429 HNRNPA0Q13151 305 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms