RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 EEDO75530 441 aaKnown RBP18.02■□□□□ 0.48
SMPD3-201ENST00000219334 GSTM2P28161 218 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 CLCN2P51788 898 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 OR8J1Q8NGP2 316 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 NECAB3Q96P71 396 aaPredicted RBP18.02■□□□□ 0.48
SMPD3-201ENST00000219334 IER5LQ5T953 404 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 RANBP10Q6VN20 620 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 PDZD3Q86UT5 571 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 PDLIM7Q9NR12 457 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 IL17CQ9P0M4 197 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 FXYD6-FXYD2A0A087WZ82 144 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 C17orf105B2RV13 164 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 TYROBPO43914 113 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 SLC7A9P82251 487 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 WACQ9BTA9 647 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 FXYD6Q9H0Q3 95 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 C2orf42Q9NWW7 574 aa18.02■□□□□ 0.48
SMPD3-201ENST00000219334 LRRN3E7EW58 273 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 PHYHO14832 338 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 GSTT2P0CG29 244 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 ADH7P40394 386 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 ACTA2P62736 377 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 ACTG2P63267 376 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 BNIP3Q12983 259 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF551Q7Z340 670 aaPredicted RBP18.02■□□□□ 0.47
SMPD3-201ENST00000219334 TAMM41Q96BW9 452 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 SHISA4Q96DD7 197 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 LRRN3Q9H3W5 708 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 RDH8Q9NYR8 311 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 FAM189A1O60320 539 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 PYCR1P32322 319 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF33BQ06732 778 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 ATP6AP1Q15904 470 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 ATAD3CQ5T2N8 411 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 STEAP4Q687X5 459 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 ENPP6Q6UWR7 440 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 FBXL20Q96IG2 436 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF317Q96PQ6 595 aaPredicted RBP18.02■□□□□ 0.47
SMPD3-201ENST00000219334 DPH2Q9BQC3 489 aaPredicted RBP18.02■□□□□ 0.47
SMPD3-201ENST00000219334 ADAM18Q9Y3Q7 739 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 CMAHPQ9Y471 501 aa18.02■□□□□ 0.47
SMPD3-201ENST00000219334 SMAD6O43541 496 aaKnown RBP18.01■□□□□ 0.47
SMPD3-201ENST00000219334 COL9A2Q14055 689 aaPredicted RBP18.01■□□□□ 0.47
SMPD3-201ENST00000219334 GRK1Q15835 563 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 TP53INP2Q8IXH6 220 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 TEX26Q8N6G2 289 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 TRMT10AQ8TBZ6 339 aaKnown RBP18.01■□□□□ 0.47
SMPD3-201ENST00000219334 PPP1R14BQ96C90 147 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 TCEAL4Q96EI5 215 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 TRMT2BQ96GJ1 504 aaKnown RBP18.01■□□□□ 0.47
SMPD3-201ENST00000219334 TMEM68Q96MH6 324 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF451Q9Y4E5 1061 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 ADAMTS4O75173 837 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF829Q3KNS6 432 aaPredicted RBP18.01■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF584Q8IVC4 421 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 CDRT4Q8N9R6 151 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 FUBP1Q96AE4 644 aaKnown RBP18.01■□□□□ 0.47
SMPD3-201ENST00000219334 TMEM19Q96HH6 336 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 SPO11Q9Y5K1 396 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 UGT2B10P36537 528 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 CDK3Q00526 305 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 TAS1R1Q7RTX1 841 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 CWH43Q9H720 699 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF442Q9H7R0 627 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 KCNIP1Q9NZI2 227 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 ICKQ9UPZ9 632 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 PTGDR2Q9Y5Y4 395 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 URB1O60287 2271 aaKnown RBP18.01■□□□□ 0.47
SMPD3-201ENST00000219334 PEX14O75381 377 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 EPHA4P54764 986 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 ARSKQ6UWY0 536 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 MINDY2Q8NBR6 621 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 FCAMRQ8WWV6 532 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 CNN2Q99439 309 aaKnown RBP18.01■□□□□ 0.47
SMPD3-201ENST00000219334 ATG5Q9H1Y0 275 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 ACTL7AQ9Y615 435 aa18.01■□□□□ 0.47
SMPD3-201ENST00000219334 SMAD9O15198 467 aaKnown RBP18■□□□□ 0.47
SMPD3-201ENST00000219334 CRISP1P54107 249 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 MELKQ14680 651 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 LCTLQ6UWM7 567 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 OR52N2Q8NGI0 321 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 OR13C3Q8NGS6 347 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 MS4A4EQ96PG1 132 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 SLC39A1Q9NY26 324 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 A0A0A6YYC8 382 aaPredicted RBP18■□□□□ 0.47
SMPD3-201ENST00000219334 SMIM30A4D0T7 59 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 I3L1I5 382 aaPredicted RBP18■□□□□ 0.47
SMPD3-201ENST00000219334 CCRL2O00421 344 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 S100A1P23297 94 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 CFL1P23528 166 aaKnown RBP18■□□□□ 0.47
SMPD3-201ENST00000219334 RBPJQ06330 500 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 LRRN1Q6UXK5 716 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 PARS2Q7L3T8 475 aaKnown RBP18■□□□□ 0.47
SMPD3-201ENST00000219334 DTD2Q96FN9 168 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 PTBP2Q9UKA9 531 aaKnown RBP18■□□□□ 0.47
SMPD3-201ENST00000219334 TRAPPC13A5PLN9 417 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 ARHGEF15O94989 841 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 IL4RP24394 825 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 CERS1P27544 350 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms