RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 HMX3A6NHT5 357 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 RB1P06400 928 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 DDX5P17844 614 aaKnown RBP16.3■□□□□ 0.2
USB1-201ENST00000219281 ST8SIA6P61647 398 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 COX10Q12887 443 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 ASAH1Q13510 395 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 PDZK1Q5T2W1 519 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 LAPTM4BQ86VI4 370 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 UBE2J2Q8N2K1 259 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 CLDN22Q8N7P3 220 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 LILRB4Q8NHJ6 448 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 GATAD2BQ8WXI9 593 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 HERVK_113Q902F9 699 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 TFGQ92734 400 aaPredicted RBP16.3■□□□□ 0.2
USB1-201ENST00000219281 ZNF514Q96K75 400 aaPredicted RBP16.3■□□□□ 0.2
USB1-201ENST00000219281 SLC35G5Q96KT7 338 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 TTYH2Q9BSA4 534 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 MAN2C1Q9NTJ4 1040 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 TOR4AQ9NXH8 423 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 FBXW2Q9UKT8 454 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 WASHC1A8K0Z3 465 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 CACNB4O00305 520 aaPredicted RBP16.3■□□□□ 0.2
USB1-201ENST00000219281 HNRNPA1P09651 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
USB1-201ENST00000219281 CISD3P0C7P0 127 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 MYL12AP19105 171 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 GPC1P35052 558 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 BNC1Q01954 994 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 MESP2Q0VG99 397 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 DHCR24Q15392 516 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 SLC25A30Q5SVS4 291 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 WASH2PQ6VEQ5 465 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 UBE2Q1Q7Z7E8 422 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 PDZD3Q86UT5 571 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 CAMKK1Q8N5S9 505 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 OR6T1Q8NGN1 323 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 RSPRY1Q96DX4 576 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 MCOLN1Q9GZU1 580 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 PELI2Q9HAT8 420 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 GPR34Q9UPC5 381 aa16.3■□□□□ 0.2
USB1-201ENST00000219281 CCDC182A6NF36 153 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 EPPINO95925 133 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 LGI1O95970 557 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 CSF2P04141 144 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 SSTR4P31391 388 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 PTGER1P34995 402 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 RPS5P46782 204 aaKnown RBP16.29■□□□□ 0.2
USB1-201ENST00000219281 SLC9A3P48764 834 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 WNT4P56705 351 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 CDK5Q00535 292 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 KLHL22Q53GT1 634 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 PYDC2Q56P42 97 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 CD300LDQ6UXZ3 194 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 C11orf74Q86VG3 221 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 C12orf40Q86WS4 652 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 NUDT13Q86X67 352 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 DCUN1D3Q8IWE4 304 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 GALNT12Q8IXK2 581 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 ASCC1Q8N9N2 400 aaKnown RBP16.29■□□□□ 0.2
USB1-201ENST00000219281 TM9SF4Q92544 642 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 KCTD7Q96MP8 289 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 QRFPRQ96P65 431 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 DEPDC7Q96QD5 511 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 YIPF4Q9BSR8 244 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 TMEM106CQ9BVX2 250 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 PLA2G12AQ9BZM1 189 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 EGLN3Q9H6Z9 239 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 ZSCAN32Q9NX65 697 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 SLC23A2Q9UGH3 650 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 PRKAG2Q9UGJ0 569 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 NUFIP1Q9UHK0 495 aaKnown RBP16.29■□□□□ 0.2
USB1-201ENST00000219281 C5orf67F2Z3F1 127 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 CXCR2P25025 360 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 PRKAG1P54619 331 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 GAS1P54826 345 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 EFNB1P98172 346 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 UBE3AQ05086 875 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 CDK10Q15131 360 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 CRTC2Q53ET0 693 aaPredicted RBP16.29■□□□□ 0.2
USB1-201ENST00000219281 TCEAL5Q5H9L2 206 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 C3orf38Q5JPI3 329 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 HSDL2Q6YN16 418 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 KIF18BQ86Y91 864 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 SYT14Q8NB59 555 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 PHOSPHO2Q8TCD6 241 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 FGF11Q92914 225 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 OTUB2Q96DC9 234 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 RNFT2Q96EX2 444 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 TM9SF2Q99805 663 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 GLIPR2Q9H4G4 154 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 GPR52Q9Y2T5 361 aa16.29■□□□□ 0.2
USB1-201ENST00000219281 PPM1DO15297 605 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 NDUFS4O43181 175 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 OR1F1O43749 312 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 PRNPP04156 253 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 SERPIND1P05546 499 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 NR2F6P10588 404 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 EN2P19622 333 aaPredicted RBP16.28■□□□□ 0.2
USB1-201ENST00000219281 PPP2R1BP30154 601 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 BUD31P41223 144 aaPredicted RBP16.28■□□□□ 0.2
USB1-201ENST00000219281 CCR8P51685 355 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms