RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Cntn4Q69Z26 1026 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pfkfb4Q6DTY7 469 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Crls1Q80ZM8 303 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tprg1Q8CB49 279 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Fate1Q8CEK7 99 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tmem185bQ8R3R5 350 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Olfr1310Q8VF85 312 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Zfp65Q91W94 390 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ces2cQ91WG0 561 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Phf10Q9D8M7 497 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cntd1Q9D995 334 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pfn3Q9DAD6 137 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cldn9Q9Z0S7 217 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 CcniQ9Z2V9 377 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Sdk2Q6V4S5 2176 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 A0A1L1ST33 502 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 5430401F13RikE9Q328 175 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Znf296E9Q6W4 445 aaKnown RBP6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Il20rbE9Q9A6 308 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm17555F6U8B9 371 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pot1bH7BX60 640 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Rgs5O08850 181 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 C1dO35473 141 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gabra3P26049 492 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cd40lgP27548 260 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Hcrtr1P58307 416 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 AbatP61922 500 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Slc30a3P97441 388 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 CxadrP97792 365 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gch1Q05915 241 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 SctQ08535 133 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tigd2Q0VBL1 525 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Slc6a3Q61327 619 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Itm2aQ61500 263 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pkp4Q68FH0 1190 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gpr6Q6YNI2 363 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Nadsyn1Q711T7 725 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Arl15Q8BGR6 204 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Fam92aQ8BP22 355 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Agpat4Q8K4X7 378 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Mcfd2Q8K5B2 145 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cdt1Q8R4E9 557 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Man2c1Q91W89 1039 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Mrgprb5Q91ZB9 322 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cd209aQ91ZX1 238 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Actr3Q99JY9 418 aaKnown RBP6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Q99KU6 348 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Actrt2Q9D9L5 377 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Lrrc69Q9D9Q0 347 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ddx59Q9DBN9 619 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tsc22d4Q9EQN3 387 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Plek2Q9WV52 353 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Uba2Q9Z1F9 638 aa6.53□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm28576A0A087WRP6 222 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm5141A0A0J9YUW3 581 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr1160A2AVT0 319 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr1164A2AVT5 326 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Sh3yl1O08641 340 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rhox6O70238 227 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 NagluO88325 739 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 P06324 132 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Sftpa1P35242 248 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pex2P55098 305 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rps17P63276 135 aaKnown RBP6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Shox2P70390 331 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Larp7Q05CL8 570 aaKnown RBP6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Cyp2j13Q3UNV4 503 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 AccslQ3UX83 580 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Prkg2Q61410 762 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Otub1Q7TQI3 271 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Q810N5 247 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mospd3Q8BGG6 235 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gk5Q8BX05 534 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Bend5Q8C6D4 421 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Arel1Q8CHG5 823 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pih1d2Q8CHR9 315 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Vmn1r189Q8K3N3 312 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 St7lQ8K4P7 559 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr48Q8VGN4 301 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Srxn1Q9D975 136 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tex44Q9DA60 530 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pdzk1Q9JIL4 519 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nipa2Q9JJC8 359 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 HcstQ9QUJ0 79 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 NfkbiaQ9Z1E3 314 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f15A0A087WR44 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f12A0A0A0MQP3 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f9A2BFZ7 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f7A2BHG6 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f19A2CG71 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f10A2CG92 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f3A2CGC2 496 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Sult6b2B7ZWN4 290 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f13B8JKF6 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Lrrc31F6VYM1 502 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f2J3QMS5 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f25J3QMV9 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f6J3QMW9 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f26J3QNK2 498 aa6.52□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Btbd35f24J3QNQ5 498 aa6.52□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms