RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Olfr396-ps1A0A0U1RNF5 211 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 ThP24529 498 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Stfa3P35173 103 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Syt4P40749 425 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hcrtr2P58308 460 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vipr1P97751 459 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Dlk1Q09163 385 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Elmod1Q3V1U8 326 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Pithd1Q8BWR2 211 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Irak2Q8CFA1 622 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Wdr45Q91VM3 360 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Spata19Q9DAQ9 154 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 ScelQ9EQG3 652 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm17190V9GX38 357 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 A0A1L1STL9 112 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 LynP25911 512 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Commd6Q3V4B5 87 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Znf182Q6P560 627 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Slc6a7Q6PGE7 637 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 GanabQ8BHN3 944 aaKnown RBP11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Nadk2Q8C5H8 452 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Pih1d2Q8CHR9 315 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 FbrsQ8R089 466 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Exosc4Q921I9 245 aaKnown RBP11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Adck1Q9D0L4 525 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rhox2dW4VSN9 191 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn2r92L7N2A4 860 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm8050L7N2E3 205 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Igfbp5Q07079 271 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 PrtgQ2EY15 1191 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ankrd27Q3UMR0 1048 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Znf689Q8BKK5 500 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mon1bQ8BMQ8 553 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Adipor2Q8BQS5 386 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Klhl31Q8BWA5 634 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr809Q8VEX8 328 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Fam122cQ9D5J5 180 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zfp84Q9D654 559 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Stpg4Q9DAG5 247 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Saxo1B1AXP3 476 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 4930426L09RikE9Q0N7 123 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm6356L7N2A7 188 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ighg1P01869 393 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hoxc8P09025 242 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Arhgap39P59281 1107 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Arntl2Q2VPD4 579 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Fbxo31Q3TQF0 507 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 UnklQ5FWH2 727 aaKnown RBP11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr12Q60894 333 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Q6P2K3 674 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rnf121Q8R1Z9 327 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zfp61Q923D1 555 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hint3Q9CPS6 165 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tex19.2Q9D5S1 317 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 VirmaA2AIV2 1811 aaKnown RBP11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr1095A3KPP7 308 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ceacam3E9Q6J4 706 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ctla2bP12400 113 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 TstP52196 297 aaKnown RBP11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ypel5P62700 121 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Sohlh1Q6IUP1 357 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cstf2Q8BIQ5 580 aaKnown RBP11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Asb2Q8K0L0 634 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 FntbQ8K2I1 437 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Pafah2Q8VDG7 390 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cdhr1Q8VHP6 859 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mzt2Q9CQ25 159 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Dph2Q9CR25 489 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Izumo1Q9D9J7 397 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zfp981A2A8V7 445 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zfp384E9Q1A5 584 aaKnown RBP11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 PahP16331 453 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Qsox2Q3TMX7 692 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Havcr1Q5QNS5 305 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Sema4cQ64151 834 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 NovQ64299 354 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 PrlhrQ6VMN6 370 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Pum1Q80U78 1189 aaKnown RBP11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Prps1l1Q8C5R8 318 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ppwd1Q8CEC6 646 aaKnown RBP11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Slc45a3Q8K0H7 553 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gpr18Q8K1Z6 331 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Lsm1Q8VC85 133 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ndufb2Q9CPU2 105 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Snx20Q9D2Y5 313 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ttyh1Q9D3A9 450 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 1700086D15RikQ9D9E9 151 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Il1rl2Q9ERS7 574 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mmp19Q9JHI0 527 aa11.29□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn2r34E9PVI0 852 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr172E9Q8F6 309 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn2r37F8VQD3 802 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 M6prP24668 278 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 RoraP51448 523 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Pfkfb2P70265 519 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Polr1dP97304 133 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Slc35f1Q8BGK5 408 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Stfa2l1Q8BWM3 103 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Spred2Q924S7 410 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 TMEM121BQ99MX7 572 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms