RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 SLC26A5P58743 744 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 EEF1A2Q05639 463 aaKnown RBP11.48□□□□□ -0.57
LINC00339-213ENST00000642137 SRSF6Q13247 344 aaKnown RBP11.48□□□□□ -0.57
LINC00339-213ENST00000642137 LTB4RQ15722 352 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 EXT1Q16394 746 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 FHL5Q5TD97 284 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 REP15Q6BDI9 236 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 TMEM107Q6UX40 140 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 DLEU7Q6UYE1 221 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 ZNF621Q6ZSS3 439 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 RETREG3Q86VR2 466 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 OR2L13Q8N349 312 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 VWA5B2Q8N398 1253 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 ZSCAN1Q8NBB4 408 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 B3GNT7Q8NFL0 401 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 OR7G2Q8NG99 324 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 OR1N1Q8NGS0 311 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 M1APQ8TC57 530 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 SLC2A12Q8TD20 617 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 SFXN5Q8TD22 340 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 ZNF721Q8TF20 911 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 THAP4Q8WY91 577 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 KAT2AQ92830 837 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 FBXL20Q96IG2 436 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 MESP1Q9BRJ9 268 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 INPP5KQ9BT40 448 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 SEMA4CQ9C0C4 833 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 CXorf36Q9H7Y0 433 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 GID8Q9NWU2 228 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 P4HTMQ9NXG6 502 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 VPS4AQ9UN37 437 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 PCDHB14Q9Y5E9 798 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 CDC14CA4D256 554 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 C1QTNF9BB2RNN3 333 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 UPK1AO00322 258 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 NKX2-8O15522 239 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 SEC24DO94855 1032 aaPredicted RBP11.47□□□□□ -0.57
LINC00339-213ENST00000642137 IGKV3-11P04433 115 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 C1QTNF9P0C862 333 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 T-ENOLP0DO92 83 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 ESRRAP11474 423 aaPredicted RBP11.47□□□□□ -0.57
LINC00339-213ENST00000642137 WT1P19544 449 aaPredicted RBP11.47□□□□□ -0.57
LINC00339-213ENST00000642137 CALB2P22676 271 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 PTPN6P29350 595 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 MC3RP41968 323 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 CDKN2CP42773 168 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 PGDP52209 483 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 MRPS35P82673 323 aaKnown RBP11.47□□□□□ -0.57
LINC00339-213ENST00000642137 PRR5P85299 388 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 ART3Q13508 389 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 C6orf10Q5SRN2 563 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 BROXQ5VW32 411 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 PLAG1Q6DJT9 500 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 ZCCHC12Q6PEW1 402 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 BHLHB9Q6PI77 547 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 UNQ6494/PRO21346Q6UXR6 183 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 HACD2Q6Y1H2 254 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 LRRC69Q6ZNQ3 347 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 MRGPREQ86SM8 312 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 SPACA3Q8IXA5 215 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 NUP43Q8NFH3 380 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 DOK4Q8TEW6 326 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 ROPN1LQ96C74 230 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 RCN3Q96D15 328 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 FAM120BQ96EK7 910 aaKnown RBP11.47□□□□□ -0.57
LINC00339-213ENST00000642137 VMP1Q96GC9 406 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 FER1L6-AS2Q96M78 137 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 NPAS2Q99743 824 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 CNPPD1Q9BV87 410 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 OR8D2Q9GZM6 311 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 OR10A5Q9H207 317 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 MMP25Q9NPA2 562 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC00339-213ENST00000642137 SLAMF8Q9P0V8 285 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 ERVK-19Q9WJR5 959 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 CFL2Q9Y281 166 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 SNX8Q9Y5X2 465 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 GMEB1Q9Y692 573 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 WDFY3Q8IZQ1 3526 aa11.47□□□□□ -0.57
LINC00339-213ENST00000642137 TRBV5-3A0A0A0MS03 114 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 TMEM8BA6NDV4 472 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 OR6C76A6NM76 312 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 HRKO00198 91 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 EBAG9O00559 213 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 AIM2O14862 343 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 COQ9O75208 318 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 UBOX5O94941 541 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 SOX30O94993 753 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 CBX6O95503 412 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 KRT75O95678 551 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 CBX7O95931 251 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 CLPSP04118 112 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 GSNP06396 782 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 HOXB9P17482 250 aaPredicted RBP11.46□□□□□ -0.57
LINC00339-213ENST00000642137 SSTR4P31391 388 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 PTGER1P34995 402 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 CLCN2P51788 898 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 SLC37A1P57057 533 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 AP2B1P63010 937 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 NFYCQ13952 458 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms