RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ARRDC3Q96B67 414 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 NUS1Q96E22 293 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 LRRC3BQ96PB8 259 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 NELL2Q99435 816 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 PHOX2BQ99453 314 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 TM7SF3Q9NS93 570 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 AHSPQ9NZD4 102 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 GRIP1Q9Y3R0 1128 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 MTCL1Q9Y4B5 1905 aaKnown RBP13.07□□□□□ -0.32
PHGDH-233ENST00000642021 HIDE1A8MVS5 230 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 HOXC11O43248 304 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-233ENST00000642021 CSF3P09919 207 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 C6P13671 934 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 SDC2P34741 201 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 CAV3P56539 151 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 EFNB1P98172 346 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 RNLSQ5VYX0 342 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 UBE3DQ7Z6J8 389 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 TRIM69Q86WT6 500 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 SIX5Q8N196 739 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 OR4K5Q8NGD3 323 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 OR6T1Q8NGN1 323 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 RAD51AP1Q96B01 352 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 ZNF582Q96NG8 517 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-233ENST00000642021 TEFMQ96QE5 360 aaKnown RBP13.07□□□□□ -0.32
PHGDH-233ENST00000642021 POLDIP3Q9BY77 421 aaKnown RBP13.07□□□□□ -0.32
PHGDH-233ENST00000642021 OR2B2Q9GZK3 357 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 OR51I1Q9H343 314 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 DPEP2Q9H4A9 486 aa13.07□□□□□ -0.32
PHGDH-233ENST00000642021 DIMT1Q9UNQ2 313 aaKnown RBP13.07□□□□□ -0.32
PHGDH-233ENST00000642021 SPIN1Q9Y657 262 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-233ENST00000642021 GOLGA4Q13439 2230 aaKnown RBP13.07□□□□□ -0.32
PHGDH-233ENST00000642021 TCF20Q9UGU0 1960 aaKnown RBP13.07□□□□□ -0.32
PHGDH-233ENST00000642021 DNAH14Q0VDD8 3507 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 PEX14O75381 377 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 PRKRAO75569 313 aaKnown RBP13.06□□□□□ -0.32
PHGDH-233ENST00000642021 CISD3P0C7P0 127 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 FRKP42685 505 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-233ENST00000642021 RPS25P62851 125 aaKnown RBP13.06□□□□□ -0.32
PHGDH-233ENST00000642021 NDUFA5Q16718 116 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 TBRG1Q3YBR2 411 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 TCEAL5Q5H9L2 206 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 FAM92BQ6ZTR7 304 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 C11orf74Q86VG3 221 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 IQCHQ86VS3 1027 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 C17orf64Q86WR6 236 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 PLA2G15Q8NCC3 412 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 GATAD2BQ8WXI9 593 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 LRIG1Q96JA1 1093 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 LINC00615Q96LM1 132 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-233ENST00000642021 TM9SF2Q99805 663 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 TTYH2Q9BSA4 534 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 YIPF4Q9BSR8 244 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 MCOLN1Q9GZU1 580 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 RACGAP1Q9H0H5 632 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 C11orf54Q9H0W9 315 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-233ENST00000642021 RHBGQ9H310 441 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 NEUROD4Q9HD90 331 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 PLSCR3Q9NRY6 295 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 GPR52Q9Y2T5 361 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 C17orf113A0A1B0GUU1 675 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 A0A1W2PRQ8 180 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 LCMT2O60294 686 aaKnown RBP13.06□□□□□ -0.32
PHGDH-233ENST00000642021 PDE9AO76083 593 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 CSF2P04141 144 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 CD79BP40259 229 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 C1DQ13901 141 aaKnown RBP13.06□□□□□ -0.32
PHGDH-233ENST00000642021 ARHGEF6Q15052 776 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 SLC39A5Q6ZMH5 540 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 SHFQ7M4L6 423 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 KIF18BQ86Y91 864 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 FAM181AQ8N9Y4 354 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 MORN4Q8NDC4 146 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 TFGQ92734 400 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-233ENST00000642021 NXPE3Q969Y0 559 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 DIRAS2Q96HU8 199 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 MSLNLQ96KJ4 702 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 SNX18Q96RF0 628 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 ZNF607Q96SK3 696 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 ZCCHC2Q9C0B9 1178 aaKnown RBP13.06□□□□□ -0.32
PHGDH-233ENST00000642021 EGLN3Q9H6Z9 239 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 FBXW2Q9UKT8 454 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 KLHL20Q9Y2M5 609 aa13.06□□□□□ -0.32
PHGDH-233ENST00000642021 A0A0B4J293 547 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 ANTXRLA6NF34 631 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 FABP12A6NFH5 140 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 STATHP02808 62 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 RHOP08100 348 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 CPEP16870 476 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 ERVFC1P60507 584 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 HOXC5Q00444 222 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 ZFP69Q49AA0 526 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 TP53I13Q8NBR0 393 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-233ENST00000642021 RNF31Q96EP0 1072 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 FYTTD1Q96QD9 318 aaKnown RBP13.05□□□□□ -0.32
PHGDH-233ENST00000642021 FNDC11Q9BVV2 318 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 QRSL1Q9H0R6 528 aaKnown RBP13.05□□□□□ -0.32
PHGDH-233ENST00000642021 GLIPR2Q9H4G4 154 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 ZSCAN32Q9NX65 697 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 TRPC4Q9UBN4 977 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms