RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 WASH6PQ9NQA3 447 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 NOD1Q9Y239 953 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 CKAP5Q14008 2032 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 TRIP12Q14669 1992 aaPredicted RBP14.4□□□□□ -0.1
PMS1-221ENST00000624204 A0A0G2JLL6 359 aaPredicted RBP14.4□□□□□ -0.1
PMS1-221ENST00000624204 DVL2O14641 736 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 KDM4BO94953 1096 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 SLC6A4P31645 630 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 LIMS1P48059 325 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 TSPAN5P62079 268 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 ZNF385BQ569K4 471 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 SHEQ5VZ18 495 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 TRIM40Q6P9F5 258 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 PRRT2Q7Z6L0 340 aaPredicted RBP14.4□□□□□ -0.1
PMS1-221ENST00000624204 LINC00518Q8N0U6 118 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 OR8D4Q8NGM9 314 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 NPLOC4Q8TAT6 608 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 ASB12Q8WXK4 309 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 RAB8BQ92930 207 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 IL26Q9NPH9 171 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 KCTD5Q9NXV2 234 aa14.4□□□□□ -0.1
PMS1-221ENST00000624204 TNS1Q9HBL0 1735 aaKnown RBP14.39□□□□□ -0.11
PMS1-221ENST00000624204 CLDN7O95471 211 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 ETHE1O95571 254 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 SOD1P00441 154 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 IDSP22304 550 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 GABRA5P31644 462 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 CCR6P51684 374 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 HMGA2P52926 109 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 ERVFC1P60507 584 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 MLLT1Q03111 559 aaPredicted RBP14.39□□□□□ -0.11
PMS1-221ENST00000624204 RBM45Q8IUH3 476 aaKnown RBP14.39□□□□□ -0.11
PMS1-221ENST00000624204 SAMD12Q8N8I0 201 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 TTLQ8NG68 377 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 RNFT2Q96EX2 444 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 SCMH1Q96GD3 660 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 ZFYVE1Q9HBF4 777 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 RDH14Q9HBH5 336 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 BRD7Q9NPI1 651 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 BTNL2Q9UIR0 455 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 ZFR2Q9UPR6 939 aaKnown RBP14.39□□□□□ -0.11
PMS1-221ENST00000624204 A0A1B0GVM2 712 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 MVDP53602 400 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 CAMK2DQ13557 499 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 DOC2AQ14183 400 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 ZNF770Q6IQ21 691 aaPredicted RBP14.39□□□□□ -0.11
PMS1-221ENST00000624204 OR7G3Q8NG95 312 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 SCRN2Q96FV2 425 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 ERMAPQ96PL5 475 aaPredicted RBP14.39□□□□□ -0.11
PMS1-221ENST00000624204 METTL17Q9H7H0 456 aaPredicted RBP14.39□□□□□ -0.11
PMS1-221ENST00000624204 KCMF1Q9P0J7 381 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 ANGPT4Q9Y264 503 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 SF3B6Q9Y3B4 125 aaKnown RBP14.39□□□□□ -0.11
PMS1-221ENST00000624204 LOC285556D6RIA3 1793 aa14.39□□□□□ -0.11
PMS1-221ENST00000624204 C5orf58C9J3I9 102 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 K7ERQ8 282 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 LALBAP00709 142 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 CD3GP09693 182 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 ZP3P21754 424 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 PUM1Q14671 1186 aaKnown RBP eCLIP14.38□□□□□ -0.11
PMS1-221ENST00000624204 PUS10Q3MIT2 529 aaKnown RBP14.38□□□□□ -0.11
PMS1-221ENST00000624204 TMEM201Q5SNT2 666 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 C17orf107Q6ZR85 190 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 COQ8AQ8NI60 647 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 KAT2AQ92830 837 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 ZNF582Q96NG8 517 aaPredicted RBP14.38□□□□□ -0.11
PMS1-221ENST00000624204 SERHL2Q9H4I8 314 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 GKN1Q9NS71 199 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 CPNE7Q9UBL6 633 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 KCNMB2Q9Y691 235 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 CNTRLQ7Z7A1 2325 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 CACNA1CQ13936 2221 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 GABRPO00591 440 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 GPR171O14626 319 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 SMAD9O15198 467 aaKnown RBP14.38□□□□□ -0.11
PMS1-221ENST00000624204 NME6O75414 186 aaPredicted RBP14.38□□□□□ -0.11
PMS1-221ENST00000624204 TCRBP04435 133 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 TYMPP19971 482 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 LCN1P31025 176 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 ERVK-21P61565 698 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 RHOAP61586 193 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 MAP4K2Q12851 820 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 ZNF792Q3KQV3 632 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 CD276Q5ZPR3 534 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 ACSM5Q6NUN0 579 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 LYPD4Q6UWN0 246 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 L3MBTL4Q8NA19 623 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 OR52N2Q8NGI0 321 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 CACNG6Q9BXT2 260 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 ZMAT5Q9UDW3 170 aaKnown RBP14.38□□□□□ -0.11
PMS1-221ENST00000624204 GLYATL1P3A0A0U1RQE8 302 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 M0QZ92 97 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 SGTAO43765 313 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 TFPIP10646 304 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 JUPP14923 745 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 CD22P20273 847 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 PRPH2P23942 346 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 ACRV1P26436 265 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 PBLDP30039 288 aaPredicted RBP14.38□□□□□ -0.11
PMS1-221ENST00000624204 IRS1P35568 1242 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms