RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ST8SIA6P61647 398 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 SPIBQ01892 262 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 SULT2A1Q06520 285 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 ABRQ12979 859 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 SCGB2A2Q13296 93 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 DDX39BQ13838 428 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 SGCBQ16585 318 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 CCDC57Q2TAC2 916 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 HERC4Q5GLZ8 1057 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 AGAP7PQ5VUJ5 663 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 RNLSQ5VYX0 342 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 FUT10Q6P4F1 479 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 CLEC2AQ6UVW9 174 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 SYVN1Q86TM6 617 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 KRTAP11-1Q8IUC1 163 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 WDR49Q8IV35 697 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 PSTKQ8IV42 348 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 ZC3H3Q8IXZ2 948 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 ZNF679Q8IYX0 411 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 CLYBLQ8N0X4 340 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 PRSS35Q8N3Z0 413 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 TEX26Q8N6G2 289 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 BANPQ8N9N5 519 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 OR7G3Q8NG95 312 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 RHOXF1Q8NHV9 184 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 ZNF671Q8TAW3 534 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 C5orf30Q96GV9 206 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 SAMD8Q96LT4 415 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 INTS14Q96SY0 518 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 PLIN2Q99541 437 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 HNRNPABQ99729 332 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 CARD6Q9BX69 1037 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 CCSER1Q9C0I3 900 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 LSG1Q9H089 658 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 IQCGQ9H095 443 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 FNDC4Q9H6D8 234 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 NGBQ9NPG2 151 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 RPRD1BQ9NQG5 326 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 RAB20Q9NX57 234 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 IL20Q9NYY1 176 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 VPS18Q9P253 973 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 ANKMY1Q9P2S6 941 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 MAD2L2Q9UI95 211 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 STRAPQ9Y3F4 350 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 TRGV8A0A0C4DH27 118 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 IQCMA0A1B0GVH7 501 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 FAM230AA0A1W2PPH8 454 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 A0A1W2PQ72 361 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 SMIM30A4D0T7 59 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 ZSCAN5BA6NJL1 495 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 A8MU76 341 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 PRSS46E5RG02 174 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 E5RGE8 158 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 E2F3O00716 465 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 MLNRO43193 412 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 AK1P00568 194 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 MT-ATP6P00846 226 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 MT-ND2P03891 347 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 FGF4P08620 206 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 ABHD2P08910 425 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 UBTFL6P0CB48 400 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-229ENST00000621897 THRBP10828 461 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 KLK2P20151 261 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 PTPN4P29074 926 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 RFC2P35250 354 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 PRKCIP41743 596 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 GMPSP49915 693 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-229ENST00000621897 METAP1P53582 386 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 MFAP3P55082 362 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 CCDC173Q0VFZ6 552 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 GIT2Q14161 759 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 CCDC152Q4G0S7 254 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 KCTD21Q4G0X4 260 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 C6orf136Q5SQH8 315 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 C1orf185Q5T7R7 199 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 BTNL8Q6UX41 500 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 NHLRC1Q6VVB1 395 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 CCDC80Q76M96 950 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 CENPQQ7L2Z9 268 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-229ENST00000621897 MTERF4Q7Z6M4 381 aaKnown RBP3.29□□□□□ -1.88
BRCA1-229ENST00000621897 KLHL7Q8IXQ5 586 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 TIGD4Q8IY51 512 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 CD177Q8N6Q3 437 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 EIF1ADQ8N9N8 165 aaKnown RBP3.29□□□□□ -1.88
BRCA1-229ENST00000621897 NABP1Q96AH0 204 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 TPD52L3Q96J77 140 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 ATP6V1G3Q96LB4 118 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 SSX3Q99909 188 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 DDX50Q9BQ39 737 aaKnown RBP3.29□□□□□ -1.88
BRCA1-229ENST00000621897 ALKBH7Q9BT30 221 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-229ENST00000621897 TPPP3Q9BW30 176 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 SLITRK2Q9H156 845 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 CARD9Q9H257 536 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 PARVGQ9HBI0 331 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 TUFT1Q9NNX1 390 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 RAB9BQ9NP90 201 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 TNFRSF19Q9NS68 423 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 DNAJC17Q9NVM6 304 aaKnown RBP3.29□□□□□ -1.88
BRCA1-229ENST00000621897 SMPD3Q9NY59 655 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-229ENST00000621897 ZNF581Q9P0T4 197 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 239.5 ms