RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 HMOX2P30519 316 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 DEKP35659 375 aaKnown RBP15.78■□□□□ 0.12
HMGN3-203ENST00000620514 SOX18P35713 384 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 ALDH9A1P49189 494 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 MGAT2Q10469 447 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 DUSP8Q13202 625 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 SLC10A1Q14973 349 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 HLA-DQA1Q5Y7H0 255 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 BICRALQ6AI39 1079 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 SCIMPQ6UWF3 145 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 SLC22A9Q8IVM8 553 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 DND1Q8IYX4 353 aaKnown RBP15.78■□□□□ 0.12
HMGN3-203ENST00000620514 PRR22Q8IZ63 422 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 SIMC1Q8NDZ2 872 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 ADCY4Q8NFM4 1077 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 TP53INP1Q96A56 240 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 KLHL29Q96CT2 875 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 JSRP1Q96MG2 331 aaPredicted RBP15.78■□□□□ 0.12
HMGN3-203ENST00000620514 KCNA7Q96RP8 456 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 ACPTQ9BZG2 426 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 BRINP2Q9C0B6 783 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 GSTO2Q9H4Y5 243 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 ZNF703Q9H7S9 590 aaPredicted RBP15.78■□□□□ 0.12
HMGN3-203ENST00000620514 ZFP64Q9NPA5 681 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 NMRK1Q9NWW6 199 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 COQ3Q9NZJ6 369 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 MAT2BQ9NZL9 334 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 CNIH4Q9P003 139 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 HEY2Q9UBP5 337 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 TIMM22Q9Y584 194 aa15.78■□□□□ 0.12
HMGN3-203ENST00000620514 CREBBPQ92793 2442 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 ABCA12Q86UK0 2595 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 NCKAP5O14513 1909 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 GOLGA6L10A6NI86 522 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 ULK1O75385 1050 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 HSD3B1P14060 373 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 ENDOUP21128 410 aaKnown RBP15.77■□□□□ 0.12
HMGN3-203ENST00000620514 GPX3P22352 226 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 HSD3B2P26439 372 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 TNFRSF8P28908 595 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 SLCO1A2P46721 670 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 MAN2A2P49641 1150 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 NUP107P57740 925 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 RAE1P78406 368 aaKnown RBP15.77■□□□□ 0.12
HMGN3-203ENST00000620514 HMGCS1Q01581 520 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 PMPCAQ10713 525 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 CSTF3Q12996 717 aaKnown RBP15.77■□□□□ 0.12
HMGN3-203ENST00000620514 LCP2Q13094 533 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 EXOSC7Q15024 291 aaKnown RBP15.77■□□□□ 0.12
HMGN3-203ENST00000620514 LTB4RQ15722 352 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 NNATQ16517 81 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 PRICKLE4Q2TBC4 344 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 C6orf163Q5TEZ5 329 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 TMEM211Q6ICI0 200 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 ZNF585AQ6P3V2 769 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 SH2D5Q6ZV89 423 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 CCDC71Q8IV32 467 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-203ENST00000620514 VWA5B2Q8N398 1253 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 CCNYL1Q8N7R7 359 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 OR7G1Q8NGA0 311 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 CA5BP1Q8WTZ4 195 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 DIO2Q92813 273 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 CNRIP1Q96F85 164 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-203ENST00000620514 APIPQ96GX9 242 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 DOHHQ9BU89 302 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 NXF5Q9H1B4 397 aaKnown RBP15.77■□□□□ 0.12
HMGN3-203ENST00000620514 LDAHQ9H6V9 325 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 RUBCNLQ9H714 662 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 DCDC2Q9UHG0 476 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 MCM8Q9UJA3 840 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 BOKQ9UMX3 212 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-203ENST00000620514 RNF6Q9Y252 685 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 NPFFR2Q9Y5X5 522 aa15.77■□□□□ 0.12
HMGN3-203ENST00000620514 NINQ8N4C6 2090 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 OR14I1A6ND48 311 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 G3V2L1 256 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 AQP7O14520 342 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 UBFD1O14562 309 aaKnown RBP15.76■□□□□ 0.11
HMGN3-203ENST00000620514 BCKDKO14874 412 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 ESRRBO95718 433 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 ATP1B1P05026 303 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 IL3P08700 152 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 CSNK2A2P19784 350 aaPredicted RBP15.76■□□□□ 0.11
HMGN3-203ENST00000620514 PTGER4P35408 488 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 FOXA1P55317 472 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 PKNOX1P55347 436 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 TRA2BP62995 288 aaKnown RBP15.76■□□□□ 0.11
HMGN3-203ENST00000620514 MAP4K2Q12851 820 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 RPS6KA2Q15349 733 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 ZNF295-AS1Q8N0V1 137 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 LRRC25Q8N386 305 aaPredicted RBP15.76■□□□□ 0.11
HMGN3-203ENST00000620514 SPPL2AQ8TCT8 520 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 UBLCP1Q8WVY7 318 aaPredicted RBP15.76■□□□□ 0.11
HMGN3-203ENST00000620514 RND1Q92730 232 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 ZNF681Q96N22 645 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 FAIM2Q9BWQ8 316 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 ITPAQ9BY32 194 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 TRIM8Q9BZR9 551 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 SLC6A15Q9H2J7 730 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 C12orf65Q9H3J6 166 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms