RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 CLEC1AQ8NC01 280 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 APCDD1LQ8NCL9 501 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 SIMC1Q8NDZ2 872 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 OR7G2Q8NG99 324 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 OR4A15Q8NGL6 344 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 ELP4Q96EB1 424 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 VMP1Q96GC9 406 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 INPP5KQ9BT40 448 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 CCDC106Q9BWC9 280 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 MMP25Q9NPA2 562 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 SLC52A3Q9NQ40 469 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 COPS7AQ9UBW8 275 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 BCAP29Q9UHQ4 241 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 ZNF639Q9UID6 485 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 BTNL2Q9UIR0 455 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 ERVK-11Q9UQG0 969 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 SNX8Q9Y5X2 465 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 CROCCQ5TZA2 2017 aa14.54□□□□□ -0.08
PCDHGC3-204ENST00000617222 FREM2Q5SZK8 3169 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 FRYQ5TBA9 3013 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 TRBV11-1A0A0K0K1C0 115 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 LOC100653049A0A140TA62 436 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 A6NL46 340 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 PLOD2O00469 737 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 PLOD3O60568 738 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 KRT34O76011 436 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 SLITRK5O94991 958 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 CBX7O95931 251 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 IGKV3-11P04433 115 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 SNRPB2P08579 225 aaKnown RBP14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 ITGAMP11215 1152 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 CAPN3P20807 821 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 ITGA3P26006 1051 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 CCL11P51671 97 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 CLCN2P51788 898 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 CBX1P83916 185 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 TLR1Q15399 786 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 MAPKAPK3Q16644 382 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 FHL5Q5TD97 284 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 OR7G1Q8NGA0 311 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 OR52R1Q8NGF1 315 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 ELP5Q8TE02 316 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 CRELD1Q96HD1 420 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 THOC3Q96J01 351 aaKnown RBP14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 CCDC115Q96NT0 180 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 SEMA4CQ9C0C4 833 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 OR10A5Q9H207 317 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 CXorf36Q9H7Y0 433 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 RMND5AQ9H871 391 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 SIRT3Q9NTG7 399 aaPredicted RBP14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 TAS2R9Q9NYW1 312 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 ZNF223Q9UK11 482 aaPredicted RBP14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 KCNMB2Q9Y691 235 aa14.53□□□□□ -0.08
PCDHGC3-204ENST00000617222 ACACBO00763 2458 aa14.52□□□□□ -0.08
PCDHGC3-204ENST00000617222 A0A087WV62 115 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 A0A1W2PP18 115 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 DYTNA2CJ06 578 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 A8MUI8 341 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 UPK1AO00322 258 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 SLC22A2O15244 555 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 NME6O75414 186 aaPredicted RBP14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 DCTN3O75935 186 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 DNAJB5O75953 348 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 CLPSP04118 112 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 PRKAG1P54619 331 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 SLC37A1P57057 533 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 LRRC74AQ0VAA2 488 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 DUSP8Q13202 625 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 SPDYE7PQ495Y7 208 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 SLC2A7Q6PXP3 512 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 C19orf48Q6RUI8 117 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 HSDL2Q6YN16 418 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 RNF111Q6ZNA4 994 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 MSANTD1Q6ZTZ1 278 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 TREML1Q86YW5 311 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 GALNT16Q8N428 558 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 ZNF615Q8N8J6 731 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 PSMA8Q8TAA3 256 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 TSPEARQ8WU66 669 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 SNRNP27Q8WVK2 155 aaKnown RBP14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 ERP27Q96DN0 273 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 ITCHQ96J02 903 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 LRRC37BQ96QE4 947 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 PANX1Q96RD7 426 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 DEFB126Q9BYW3 111 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 TRIM4Q9C037 500 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 C3orf14Q9HBI5 128 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 NEUROD4Q9HD90 331 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 SERHLQ9NQF3 203 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 DDX18Q9NVP1 670 aaKnown RBP14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 PTGFRNQ9P2B2 879 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 C19orf53Q9UNZ5 99 aaPredicted RBP14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 NDUFAF1Q9Y375 327 aa14.52□□□□□ -0.09
PCDHGC3-204ENST00000617222 ASPMQ8IZT6 3477 aa14.51□□□□□ -0.09
PCDHGC3-204ENST00000617222 ASPDHA6ND91 283 aa14.51□□□□□ -0.09
PCDHGC3-204ENST00000617222 RFXANKO14593 260 aa14.51□□□□□ -0.09
PCDHGC3-204ENST00000617222 EMC8O43402 210 aa14.51□□□□□ -0.09
PCDHGC3-204ENST00000617222 PRKNO60260 465 aaPredicted RBP14.51□□□□□ -0.09
PCDHGC3-204ENST00000617222 BCAS2O75934 225 aaPredicted RBP14.51□□□□□ -0.09
PCDHGC3-204ENST00000617222 ZFAND5O76080 213 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms