RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	GPC6	Q9Y625	555 aa	Predicted RBP	13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MYO15A	Q9UKN7	3530 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390		A0A0C4DFX4	3053 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PRAMEF27	A3QJZ7	478 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FAM47E-STBD1	D6RA91	191 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ENTPD6	O75354	484 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CTRB1	P17538	263 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PRKACA	P17612	351 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	GABRB1	P18505	474 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	KCNC4	Q03721	635 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBCE	Q15813	527 aa	Predicted RBP	13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CST6	Q15828	149 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TJAP1	Q5JTD0	557 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CTRB2	Q6GPI1	263 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OR4C11	Q6IEV9	310 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ADAMTSL4	Q6UY14	1074 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RD3	Q7Z3Z2	195 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	COMTD1	Q86VU5	262 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC22A16	Q86VW1	577 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	DENND6B	Q8NEG7	585 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TREX2	Q9BQ50	279 aa	Predicted RBP	13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TMEM106C	Q9BVX2	250 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RHBG	Q9H310	441 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CLN6	Q9NWW5	311 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OSGIN1	Q9UJX0	560 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ICK	Q9UPZ9	632 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	STON1	Q9Y6Q2	735 aa		13.14	□□□□□ -0.31
CACNA1C-231	ENST00000616390	IGKV1-8	A0A0C4DH67	115 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PGRMC2	O15173	223 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ERI3	O43414	337 aa	Known RBP	13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBX1	O43435	398 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RPLP0	P05388	317 aa	Known RBP	13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	NAGA	P17050	411 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PTN	P21246	168 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TMED10	P49755	219 aa	Known RBP	13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	VASP	P50552	380 aa	Predicted RBP	13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RUNX3	Q13761	415 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	DOC2B	Q14184	412 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FGL2	Q14314	439 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	LASP1	Q14847	261 aa	Known RBP	13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ZNF404	Q494X3	552 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	AGBL4	Q5VU57	503 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	NIPAL1	Q6NVV3	410 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ZNF793	Q6ZN11	406 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PSD4	Q8NDX1	1056 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OR14C36	Q8NHC7	312 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	HTRA1	Q92743	480 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	AIFM2	Q9BRQ8	373 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MENT	Q9BUN1	341 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	GLIPR2	Q9H4G4	154 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	C12orf10	Q9HB07	376 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	C12orf4	Q9NQ89	552 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SOBP	A7XYQ1	873 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390		E9PQ18	207 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TLR4	O00206	839 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC31A1	O15431	190 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ELAVL4	P26378	380 aa	Known RBP	13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	GTF2E2	P29084	291 aa	Known RBP	13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	BUD31	P41223	144 aa	Predicted RBP	13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	LIMS1	P48059	325 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RGS6	P49758	472 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PCBP4	P57723	403 aa	Known RBP	13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RPA4	Q13156	261 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	C2orf27A	Q580R0	203 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RTL10	Q7L3V2	364 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC46A3	Q7Z3Q1	461 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	YAF2	Q8IY57	180 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC35G5	Q96KT7	338 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	KCNS3	Q9BQ31	491 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	HDAC8	Q9BY41	377 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PELI2	Q9HAT8	420 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CD93	Q9NPY3	652 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PLCXD1	Q9NUJ7	323 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	B3GNT3	Q9Y2A9	372 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	IFT52	Q9Y366	437 aa		13.13	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PNMA8C	A0A1B0GUJ8	204 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	C4orf51	C9J302	202 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FRS3	O43559	492 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	APOL3	O95236	402 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	H1F0	P07305	194 aa	Known RBP	13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	IL32	P24001	234 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	REEP5	Q00765	189 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	UBE3A	Q05086	875 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLAMF1	Q13291	335 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SGCG	Q13326	291 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CDON	Q4KMG0	1287 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC38A6	Q8IZM9	456 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC34A3	Q8N130	599 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TCEANC	Q8N8B7	351 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FCGR1B	Q92637	280 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CAMK1G	Q96NX5	476 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FCRL4	Q96PJ5	515 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	UCK2	Q9BZX2	261 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	AICDA	Q9GZX7	198 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	POLR2J3	Q9H1A7	115 aa	Known RBP	13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	NEUROD4	Q9HD90	331 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TVP23B	Q9NYZ1	205 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms