RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 CHST14Q8NCH0 376 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 OR11H7Q8NGC8 314 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 MAPKAP1Q9BPZ7 522 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 CNOT2Q9NZN8 540 aaKnown RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 ELF5Q9UKW6 265 aaPredicted RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 LINC00862A6NCI5 91 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 PRAMEF25A6NGN4 478 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 M0R233 179 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 SLC43A1O75387 559 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 GATBO75879 557 aaKnown RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 VIPR1P32241 457 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 SOX18P35713 384 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 RPS7P62081 194 aaKnown RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 NTRK2Q16620 822 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 HUS1BQ8NHY5 278 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 NEIL3Q8TAT5 605 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 MRPS31Q92665 395 aaKnown RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 TMEM159Q96B96 161 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 TBC1D20Q96BZ9 403 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 RANBP3Q9H6Z4 567 aaPredicted RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 ATPIF1Q9UII2 106 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 ARID1BQ8NFD5 2236 aaPredicted RBP12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 A0A1W2PPL8 197 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 SH3D21A4FU49 640 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 H7C0S8 307 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 RTCAO00442 366 aaKnown RBP12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 HCN1O60741 890 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 EOMESO95936 686 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 APOC3P02656 99 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 ACLYP53396 1101 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 LIMK1P53667 647 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 FABP5Q01469 135 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 LMAN2Q12907 356 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 CLEC12AQ5QGZ9 265 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 ZNF730Q6ZMV8 503 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 DNAJB7Q7Z6W7 309 aaPredicted RBP12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 UXS1Q8NBZ7 420 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 RNFT2Q96EX2 444 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 PIP5K1AQ99755 562 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 MARVELD1Q9BSK0 173 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 TMEM43Q9BTV4 400 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 NLNQ9BYT8 704 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 STARD7Q9NQZ5 370 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 KLHL1Q9NR64 748 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 ZDHHC3Q9NYG2 299 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 PLAGL1Q9UM63 463 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 TEX13CA0A0J9YWL9 993 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 IFNW1P05000 195 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 KLK1P06870 262 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 PDHA2P29803 388 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 PRKAG1P54619 331 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 WNT3P56703 355 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 PPP3R1P63098 170 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 ZNF385BQ569K4 471 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 GDPGP1Q6ZNW5 385 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 SYNPOQ8N3V7 929 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 NANOGP1Q8N7R0 232 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 OR6M1Q8NGM8 313 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 POP5Q969H6 163 aaKnown RBP12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 SGTBQ96EQ0 304 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 PIGUQ9H490 435 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 RETREG1Q9H6L5 497 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 MIEF1Q9NQG6 463 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 NDUFB11Q9NX14 153 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 Q9Y3F1 56 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 MAB21L2Q9Y586 359 aa12.71□□□□□ -0.37
PCDHA11-202ENST00000616325 PATJQ8NI35 1801 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 MYO9BQ13459 2157 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 C5orf58C9J3I9 102 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 TSPAN6O43657 245 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 MPZL2O60487 215 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 PQBP1O60828 265 aaKnown RBP12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 ADAMTS4O75173 837 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 GCM2O75603 506 aaPredicted RBP12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 ALPPL2P10696 532 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 CFL1P23528 166 aaKnown RBP12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 GABRR2P28476 465 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 CCR6P51684 374 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 AP1S1P61966 158 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 CDK6Q00534 326 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 SF3A2Q15428 464 aaKnown RBP12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 CST9Q5W186 159 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 AGTRAPQ6RW13 159 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 ZNF740Q8NDX6 193 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 AP2M1Q96CW1 435 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 WRAP53Q9BUR4 548 aaKnown RBP12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 SERHL2Q9H4I8 314 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 BRD7Q9NPI1 651 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 OR6C2Q9NZP2 312 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 PTGFRNQ9P2B2 879 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 REV1Q9UBZ9 1251 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 ADAM30Q9UKF2 790 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 PADI2Q9Y2J8 665 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 CDH10Q9Y6N8 788 aa12.71□□□□□ -0.38
PCDHA11-202ENST00000616325 HRO43593 1189 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 MPC2O95563 127 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 CD3GP09693 182 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 GIFP27352 417 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 CD79BP40259 229 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 ATP12AP54707 1039 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms