RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 A8MUA0 341 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 HCRTR2O43614 444 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 AHSA1O95433 338 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 ACVR1BP36896 505 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 CRISP1P54107 249 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 COL9A3Q14050 684 aaPredicted RBP13.18□□□□□ -0.3
CHD1-212ENST00000614616 CGB2Q6NT52 195 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 OR13C3Q8NGS6 347 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 C5orf34Q96MH7 638 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 ZNF599Q96NL3 588 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 IKZF4Q9H2S9 585 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 MINDY3Q9H8M7 445 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 OLAHQ9NV23 265 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 UBIAD1Q9Y5Z9 338 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 TRAV19A0A0A6YYK7 116 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 TUBAL3A6NHL2 446 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 HEXBP07686 556 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 APOFQ13790 326 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 GLIS1Q8NBF1 620 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 ZBTB44Q8NCP5 570 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 RNF141Q8WVD5 230 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 FOXRED1Q96CU9 486 aaPredicted RBP13.18□□□□□ -0.3
CHD1-212ENST00000614616 APMAPQ9HDC9 416 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 PARPBPQ9NWS1 579 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 PCTPQ9UKL6 214 aa13.18□□□□□ -0.3
CHD1-212ENST00000614616 MANBAO00462 879 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 ARPC1BO15143 372 aaKnown RBP13.17□□□□□ -0.3
CHD1-212ENST00000614616 SEC14L5O43304 696 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 NIPSNAP2O75323 286 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 GLUD1P00367 558 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 RAF1P04049 648 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 MRPL3P09001 348 aaKnown RBP13.17□□□□□ -0.3
CHD1-212ENST00000614616 IL12BP29460 328 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 ENPP2Q13822 863 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 MEF2DQ14814 521 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 TMEM41BQ5BJD5 291 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 OR52A5Q9H2C5 316 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 ELP3Q9H9T3 547 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 NMUR1Q9HB89 426 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 RHCGQ9UBD6 479 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 DGKEP52429 567 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 MLLT11Q13015 90 aaPredicted RBP13.17□□□□□ -0.3
CHD1-212ENST00000614616 GRB7Q14451 532 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 CYS1Q717R9 158 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 LAX1Q8IWV1 398 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 OR1M1Q8NGA1 313 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 TFAP2BQ92481 460 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 MOAP1Q96BY2 351 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 FAM212BQ9NTI7 297 aaPredicted RBP13.17□□□□□ -0.3
CHD1-212ENST00000614616 NALCNQ8IZF0 1738 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 A0A1W2PPK0 400 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 PI15O43692 258 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 MT-ND4P03905 459 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 HLA-DQB2P05538 268 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 JUNBP17275 347 aaPredicted RBP13.17□□□□□ -0.3
CHD1-212ENST00000614616 SYN1P17600 705 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 UGCGQ16739 394 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 HIST2H3PS2Q5TEC6 136 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 CXorf40BQ96DE9 158 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 KLHL15Q96M94 604 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 PRRT1Q99946 306 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 SMPD4Q9NXE4 827 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 P2RX3P56373 397 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 RACK1P63244 317 aaKnown RBP13.17□□□□□ -0.3
CHD1-212ENST00000614616 STEAP4Q687X5 459 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 POMZP3Q6PJE2 187 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 SKA3Q8IX90 412 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 NTAN1Q96AB6 310 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 PKMYT1Q99640 499 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 GPSM3Q9Y4H4 160 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 CCL22O00626 93 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 TREHO43280 583 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 MAFKO60675 156 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 KLK1P06870 262 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 EDNRBP24530 442 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 IL13RA1P78552 427 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 APOBEC3HQ6NTF7 200 aaKnown RBP13.17□□□□□ -0.3
CHD1-212ENST00000614616 PLPPR4Q7Z2D5 763 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 KIAA0319LQ8IZA0 1049 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 GPC2Q8N158 579 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 OR5W2Q8NH69 310 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 PCDHB14Q9Y5E9 798 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 SLIT2O94813 1529 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 CBY3A6NI87 242 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 D6RAR5 112 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 SMLR1H3BR10 107 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 IMPA2O14732 288 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 HOXC11O43248 304 aaPredicted RBP13.17□□□□□ -0.3
CHD1-212ENST00000614616 ACPPP15309 386 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 GPR85P60893 370 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 ZNF763Q0D2J5 394 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 GALNT13Q8IUC8 556 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 OR56A1Q8NGH5 318 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 C14orf79Q96F83 325 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.17□□□□□ -0.34e-6■■□□□ 12.9
CHD1-212ENST00000614616 SPATA31D3P0C874 917 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 SPATA31D4Q6ZUB0 917 aa13.17□□□□□ -0.3
CHD1-212ENST00000614616 KCTD12Q96CX2 325 aaKnown RBP13.17□□□□□ -0.3
CHD1-212ENST00000614616 CNN2Q99439 309 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms