RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	PM20D2	Q8IYS1	436 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	LIX1	Q8N485	282 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	OR4K14	Q8NGD5	310 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	DIO2	Q92813	273 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	RILP	Q96NA2	401 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	TIMP4	Q99727	224 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	FOXC2	Q99958	501 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	SH3GL2	Q99962	352 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	ACSS3	Q9H6R3	686 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	NOL11	Q9H8H0	719 aa	Known RBP	10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	TEX10	Q9NXF1	929 aa	Predicted RBP	10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	FETUB	Q9UGM5	382 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	CES1P1	Q9UKY3	287 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	C15orf41	Q9Y2V0	281 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	NPFFR2	Q9Y5X5	522 aa		10.2	□□□□□ -0.78
CBWD1-222	ENST00000613508	NCKAP5	O14513	1909 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508		A0A1W2PS29	197 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	CD8B2	A6NJW9	211 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	DVL2	O14641	736 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	GBA	P04062	536 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	RBP1	P09455	135 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	CPM	P14384	443 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	GDF1	P27539	372 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	PHB	P35232	272 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	CASP3	P42574	277 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	KIR2DL3	P43628	341 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	TRPC1	P48995	793 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	ASCL1	P50553	236 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	XK	P51811	444 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	IST1	P53990	364 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	NRG3	P56975	720 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	FBXW4	P57775	412 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	RPP38	P78345	283 aa	Known RBP	10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	TRAF3	Q13114	568 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	HLA-DQA1	Q5Y7H0	255 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	NSUN5P2	Q63ZY6	315 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	TIGD3	Q6B0B8	471 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	TMEM64	Q6YI46	380 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	PAGE2	Q7Z2X7	111 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	WDR53	Q7Z5U6	358 aa	Predicted RBP	10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	PLD6	Q8N2A8	252 aa	Known RBP	10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	METTL4	Q8N3J2	472 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	PTGR2	Q8N8N7	351 aa	Predicted RBP	10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	RELL2	Q8NC24	303 aa	Predicted RBP	10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	NAXE	Q8NCW5	288 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	OR52B6	Q8NGF0	335 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	DOK4	Q8TEW6	326 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	FAM222B	Q8WU58	562 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	ANP32B	Q92688	251 aa	Known RBP	10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	RNASE6	Q93091	150 aa	Known RBP	10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	UCN3	Q969E3	161 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	TMEM41A	Q96HV5	264 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	JSRP1	Q96MG2	331 aa	Predicted RBP	10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	TMUB1	Q9BVT8	246 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	OR10A5	Q9H207	317 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	ZBTB26	Q9HCK0	441 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	RASSF1	Q9NS23	344 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	DNAJB12	Q9NXW2	375 aa	Known RBP	10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	ALKBH4	Q9NXW9	302 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	AHSP	Q9NZD4	102 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	CPSF2	Q9P2I0	782 aa	Known RBP	10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	PCTP	Q9UKL6	214 aa		10.19	□□□□□ -0.78
CBWD1-222	ENST00000613508	ARHGAP21	Q5T5U3	1957 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	C15orf38-AP3S2	A0A0A6YYH1	394 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	GUCY1B2	O75343	617 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	LRAT	O95237	230 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	ATP1B1	P05026	303 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	KLK1	P06870	262 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	ABCB1	P08183	1280 aa	Predicted RBP	10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	CT62	P0C5K7	136 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	COL6A2	P12110	1019 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	POR	P16435	677 aa	Predicted RBP	10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	GPX3	P22352	226 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	ABCD3	P28288	659 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	CASQ1	P31415	396 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	CCNG1	P51959	295 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	MGAT2	Q10469	447 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	MAP4K2	Q12851	820 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	SNTA1	Q13424	505 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	DAZAP2	Q15038	168 aa	Predicted RBP	10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	FLYWCH1	Q4VC44	716 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	BICRAL	Q6AI39	1079 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	SLC48A1	Q6P1K1	146 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	ZZZ3	Q8IYH5	903 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	TNIP2	Q8NFZ5	429 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	SLC44A1	Q8WWI5	657 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	NRGN	Q92686	78 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	CTHRC1	Q96CG8	243 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	HSPBAP1	Q96EW2	488 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	LRRC46	Q96FV0	321 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	GNRHR2	Q96P88	292 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	CDK15	Q96Q40	435 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	C1QTNF3	Q9BXJ4	246 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	POLDIP3	Q9BY77	421 aa	Known RBP	10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	MRPL1	Q9BYD6	325 aa	Known RBP	10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	BRF2	Q9HAW0	419 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	ZNF358	Q9NW07	568 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	CRIM1	Q9NZV1	1036 aa		10.18	□□□□□ -0.78
CBWD1-222	ENST00000613508	MTRF1L	Q9UGC7	380 aa	Known RBP	10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms