RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 TMCO6Q96DC7 493 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 DOK1Q99704 481 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 SLC30A2Q9BRI3 323 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 LRRC3Q9BY71 257 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 KCMF1Q9P0J7 381 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 TAAR2Q9P1P5 351 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 CDC14CA4D256 554 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 DLGAP1O14490 977 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 DUX1O43812 170 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 VEGFDO43915 354 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 SLC25A12O75746 678 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 SERPINA1P01009 418 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 SCN1BQ07699 218 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 SLAMF1Q13291 335 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 CTF1Q16619 201 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 C1orf53Q5VUE5 145 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 KIAA1161Q6NSJ0 714 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 INSM2Q96T92 566 aaPredicted RBP10.31□□□□□ -0.76
FAM3A-221ENST00000612856 GDF15Q99988 308 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 IL1RAPQ9NPH3 570 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 TREX1Q9NSU2 369 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 CPNE7Q9UBL6 633 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 ZNF451Q9Y4E5 1061 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 DNAJC15Q9Y5T4 150 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 CPSF4LA6NMK7 179 aaKnown RBP10.3□□□□□ -0.76
FAM3A-221ENST00000612856 FADS2P1A8MWK0 482 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 C2orf74A8MZ97 194 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 H3BSH0 61 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 CAPN5O15484 640 aaPredicted RBP10.3□□□□□ -0.76
FAM3A-221ENST00000612856 PDPK1O15530 556 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 AP2A2O94973 939 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 C6orf47O95873 294 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 OPN1LWP04000 364 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 UBL4AP11441 157 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 MYL9P24844 172 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 ZNF140P52738 457 aaPredicted RBP10.3□□□□□ -0.76
FAM3A-221ENST00000612856 TMEM207Q6UWW9 146 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 CYS1Q717R9 158 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 GRHL3Q8TE85 626 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 SLC25A36Q96CQ1 311 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 NRTNQ99748 197 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 ITPAQ9BY32 194 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 COPS7AQ9UBW8 275 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 SH3BGRL2Q9UJC5 107 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 FAM221BA6H8Z2 402 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 SHISA7A6NL88 538 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 ACOX3O15254 700 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 AKR7A2O43488 359 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 CPNE6O95741 557 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 FCER2P06734 321 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 TNFRSF4P43489 277 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 MNX1P50219 401 aaPredicted RBP10.3□□□□□ -0.76
FAM3A-221ENST00000612856 MC1RQ01726 317 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 PYCR3Q53H96 274 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 ERICH5Q6P6B1 374 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 DTWD1Q8N5C7 304 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 OR6C4Q8NGE1 309 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 RIT1Q92963 219 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 MUL1Q969V5 352 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 TCEAL2Q9H3H9 227 aaPredicted RBP10.3□□□□□ -0.76
FAM3A-221ENST00000612856 NARFLQ9H6Q4 476 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 OAS3Q9Y6K5 1087 aaKnown RBP10.3□□□□□ -0.76
FAM3A-221ENST00000612856 A0A1W2PP18 115 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 POLR1CO15160 346 aaPredicted RBP10.3□□□□□ -0.76
FAM3A-221ENST00000612856 SUV39H1O43463 412 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 PRAMEF10O60809 474 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 PEX11BO96011 259 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 IL3P08700 152 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 CSNK2A2P19784 350 aaPredicted RBP10.3□□□□□ -0.76
FAM3A-221ENST00000612856 MMP12P39900 470 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 GALK2Q01415 458 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 NSDHLQ15738 373 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 SNAPC1Q16533 368 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 PRPF38BQ5VTL8 546 aaKnown RBP10.3□□□□□ -0.76
FAM3A-221ENST00000612856 FAM205BPQ63HN1 556 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 LETMD1Q6P1Q0 360 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 BHLHB9Q6PI77 547 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 SPRED1Q7Z699 444 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 OXR1Q8N573 874 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 FAM86B1Q8N7N1 296 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 KCNC2Q96PR1 638 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 NTN4Q9HB63 628 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 IGSF5Q9NSI5 407 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 RHCGQ9UBD6 479 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 KCNN3Q9UGI6 736 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 PCDHB14Q9Y5E9 798 aa10.3□□□□□ -0.76
FAM3A-221ENST00000612856 OR2W5A6NFC9 320 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 H0YC42 278 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 PRKNO60260 465 aaPredicted RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 PCDHGA12O60330 932 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 LDB3O75112 727 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 ALPLP05186 524 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 C1GALT1C1LP0DN25 315 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 CA5AP35218 305 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 HNMTP50135 292 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 ERVPABLB-1P60509 514 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 ADARB1P78563 741 aaKnown RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 MAT1AQ00266 395 aaKnown RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 RNASE12Q5GAN4 147 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms