RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 AIFM1O95831 613 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 POU4F1Q01851 419 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 PDIA2Q13087 525 aaKnown RBP21.34■■□□□ 1.01
MMP28-203ENST00000612672 TOMM20Q15388 145 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 ADGRE4PQ86SQ3 457 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 ZNF615Q8N8J6 731 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 SMPDL3BQ92485 455 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 RGMAQ96B86 450 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 TMEM41AQ96HV5 264 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 Q96MF0 132 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 MTERF1Q99551 399 aaKnown RBP21.34■■□□□ 1.01
MMP28-203ENST00000612672 CXorf21Q9HAI6 301 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 PRM3Q9NNZ6 103 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 MS4A12Q9NXJ0 267 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 C6orf203Q9P0P8 240 aaPredicted RBP21.34■■□□□ 1.01
MMP28-203ENST00000612672 ADAM21Q9UKJ8 722 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 DSCAMO60469 2012 aa21.34■■□□□ 1.01
MMP28-203ENST00000612672 TRIM64A6NGJ6 449 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 TRIM64BA6NI03 449 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 E7ESA3 106 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 SMAD7O15105 426 aaKnown RBP21.33■■□□□ 1.01
MMP28-203ENST00000612672 SNX4O95219 450 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 BSGP35613 385 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 PTGDSP41222 190 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 RAP1GDS1P52306 607 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 ARL4CP56559 192 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 RPS13P62277 151 aaKnown RBP21.33■■□□□ 1.01
MMP28-203ENST00000612672 BIKQ13323 160 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 ZKSCAN8Q15776 578 aaPredicted RBP21.33■■□□□ 1.01
MMP28-203ENST00000612672 TIGD3Q6B0B8 471 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 GRHL2Q6ISB3 625 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 GCNT2Q8N0V5 402 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 ZPLD1Q8TCW7 415 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 UBXN10Q96LJ8 280 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 ALG9Q9H6U8 611 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 SNX15Q9NRS6 342 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 RNF112Q9ULX5 631 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 TESMINQ9Y4I5 508 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 WIF1Q9Y5W5 379 aa21.33■■□□□ 1.01
MMP28-203ENST00000612672 SONP18583 2426 aaKnown RBP21.33■■□□□ 1
MMP28-203ENST00000612672 ROS1P08922 2347 aa21.32■■□□□ 1
MMP28-203ENST00000612672 C2orf72A6NCS6 295 aa21.32■■□□□ 1
MMP28-203ENST00000612672 UBXN8O00124 270 aa21.32■■□□□ 1
MMP28-203ENST00000612672 PGRMC2O15173 223 aa21.32■■□□□ 1
MMP28-203ENST00000612672 ERN1O75460 977 aaKnown RBP21.32■■□□□ 1
MMP28-203ENST00000612672 SEC31AO94979 1220 aaKnown RBP21.32■■□□□ 1
MMP28-203ENST00000612672 NR2F6P10588 404 aa21.32■■□□□ 1
MMP28-203ENST00000612672 SLC12A2P55011 1212 aa21.32■■□□□ 1
MMP28-203ENST00000612672 ATP6V0D1P61421 351 aa21.32■■□□□ 1
MMP28-203ENST00000612672 PCDH1Q08174 1060 aa21.32■■□□□ 1
MMP28-203ENST00000612672 PACS2Q86VP3 889 aa21.32■■□□□ 1
MMP28-203ENST00000612672 UBTD2Q8WUN7 234 aa21.32■■□□□ 1
MMP28-203ENST00000612672 UBE2E3Q969T4 207 aa21.32■■□□□ 1
MMP28-203ENST00000612672 TP53INP1Q96A56 240 aa21.32■■□□□ 1
MMP28-203ENST00000612672 INTS12Q96CB8 462 aaKnown RBP21.32■■□□□ 1
MMP28-203ENST00000612672 SECISBP2Q96T21 854 aaKnown RBP21.32■■□□□ 1
MMP28-203ENST00000612672 GPR22Q99680 433 aa21.32■■□□□ 1
MMP28-203ENST00000612672 PELOQ9BRX2 385 aaKnown RBP21.32■■□□□ 1
MMP28-203ENST00000612672 SFXN3Q9BWM7 321 aa21.32■■□□□ 1
MMP28-203ENST00000612672 GALNT9Q9HCQ5 603 aa21.32■■□□□ 1
MMP28-203ENST00000612672 SNX12Q9UMY4 172 aa21.32■■□□□ 1
MMP28-203ENST00000612672 DEFB108AA8MXU0 73 aa21.31■■□□□ 1
MMP28-203ENST00000612672 INAFM1C9JVW0 142 aa21.31■■□□□ 1
MMP28-203ENST00000612672 GBAP04062 536 aa21.31■■□□□ 1
MMP28-203ENST00000612672 SLC35E2BP0CK96 405 aa21.31■■□□□ 1
MMP28-203ENST00000612672 SLC35E2P0CK97 266 aa21.31■■□□□ 1
MMP28-203ENST00000612672 ABCD3P28288 659 aa21.31■■□□□ 1
MMP28-203ENST00000612672 GALNSP34059 522 aa21.31■■□□□ 1
MMP28-203ENST00000612672 BUD31P41223 144 aaPredicted RBP21.31■■□□□ 1
MMP28-203ENST00000612672 FUT7Q11130 342 aa21.31■■□□□ 1
MMP28-203ENST00000612672 NNATQ16517 81 aa21.31■■□□□ 1
MMP28-203ENST00000612672 ANGPTL8Q6UXH0 198 aa21.31■■□□□ 1
MMP28-203ENST00000612672 C7orf57Q8NEG2 295 aa21.31■■□□□ 1
MMP28-203ENST00000612672 ISL2Q96A47 359 aa21.31■■□□□ 1
MMP28-203ENST00000612672 NODALQ96S42 347 aa21.31■■□□□ 1
MMP28-203ENST00000612672 ATOH8Q96SQ7 321 aa21.31■■□□□ 1
MMP28-203ENST00000612672 NXF5Q9H1B4 397 aaKnown RBP21.31■■□□□ 1
MMP28-203ENST00000612672 CLCF1Q9UBD9 225 aa21.31■■□□□ 1
MMP28-203ENST00000612672 LRRC14BA6NHZ5 514 aa21.3■■□□□ 1
MMP28-203ENST00000612672 K7EPI3 171 aa21.3■■□□□ 1
MMP28-203ENST00000612672 RCBTB2O95199 551 aa21.3■■□□□ 1
MMP28-203ENST00000612672 ABCB1P08183 1280 aaPredicted RBP21.3■■□□□ 1
MMP28-203ENST00000612672 FAM58BPP0C7Q3 252 aa21.3■■□□□ 1
MMP28-203ENST00000612672 CYP4B1P13584 511 aa21.3■■□□□ 1
MMP28-203ENST00000612672 TLX1P31314 330 aaPredicted RBP21.3■■□□□ 1
MMP28-203ENST00000612672 CPA2P48052 419 aa21.3■■□□□ 1
MMP28-203ENST00000612672 SF3B4Q15427 424 aaKnown RBP eCLIP21.3■■□□□ 1
MMP28-203ENST00000612672 ISCA2Q86U28 154 aa21.3■■□□□ 1
MMP28-203ENST00000612672 P3H2Q8IVL5 708 aa21.3■■□□□ 1
MMP28-203ENST00000612672 KLHL7Q8IXQ5 586 aa21.3■■□□□ 1
MMP28-203ENST00000612672 LRRC75A-AS1Q8N1F1 130 aa21.3■■□□□ 1
MMP28-203ENST00000612672 SIMC1Q8NDZ2 872 aa21.3■■□□□ 1
MMP28-203ENST00000612672 HGDQ93099 445 aa21.3■■□□□ 1
MMP28-203ENST00000612672 RBBP8Q99708 897 aa21.3■■□□□ 1
MMP28-203ENST00000612672 PIGQQ9BRB3 760 aa21.3■■□□□ 1
MMP28-203ENST00000612672 TRIM31Q9BZY9 425 aa21.3■■□□□ 1
MMP28-203ENST00000612672 OR10A5Q9H207 317 aa21.3■■□□□ 1
MMP28-203ENST00000612672 SERHLQ9NQF3 203 aa21.3■■□□□ 1
MMP28-203ENST00000612672 NSMCE4AQ9NXX6 385 aa21.3■■□□□ 1
MMP28-203ENST00000612672 NUDT4Q9NZJ9 180 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms