RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 VLDLRP98155 873 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 IFFO1Q0D2I5 559 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CSHL1Q14406 222 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ACAP2Q15057 778 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PPP1R3AQ16821 1122 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 METTL2BQ6P1Q9 378 aaKnown RBP6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SBSNQ6UWP8 590 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PLXDC2Q6UX71 529 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 RTL4Q6ZR62 310 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 FAM47EQ6ZV65 393 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SH2D5Q6ZV89 423 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 IL17RELQ6ZVW7 336 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 FRA10AC1Q70Z53 315 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PLD3Q8IV08 490 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ZNF611Q8N823 705 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 GOLM1Q8NBJ4 401 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 B3GNT7Q8NFL0 401 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 UHMK1Q8TAS1 419 aaKnown RBP6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ZNF480Q8WV37 535 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ANKRD49Q8WVL7 239 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ASB15Q8WXK1 588 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TBC1D20Q96BZ9 403 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 FBXL8Q96CD0 374 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 MRRFQ96E11 262 aaKnown RBP6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TSNARE1Q96NA8 513 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PTCHD1Q96NR3 888 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TNFRSF13CQ96RJ3 184 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TRIB1Q96RU8 372 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 RASL10BQ96S79 203 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PKP4Q99569 1192 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TMEM109Q9BVC6 243 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PRDM14Q9GZV8 571 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ZNF703Q9H7S9 590 aaPredicted RBP6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CAB39LQ9H9S4 337 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CALHM2Q9HA72 323 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ARL15Q9NXU5 204 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TMCO1Q9UM00 188 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 OARD1Q9Y530 152 aa6.55□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PRR14LQ5THK1 2151 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 KCNE1BA0A087WTH5 132 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TRIM49D1C9J1S8 452 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 E7ENX8 843 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 HS3ST1O14792 307 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 HAT1O14929 419 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 LMX1BO60663 402 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ZNF354AO60765 605 aaPredicted RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 B4GALT2O60909 372 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 KERAO60938 352 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SYF2O95926 243 aaKnown RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PLAUP00749 431 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 IGHV4-39P01824 125 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 GSTA1P08263 222 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CCL3P10147 92 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ITGA2P17301 1181 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 IMPA1P29218 277 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 RPA3P35244 121 aaPredicted RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 GGT5P36269 586 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PIGAP37287 484 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SLCO1A2P46721 670 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TRPC1P48995 793 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 MTTPP55157 894 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CASP9P55211 416 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 RPS4XP62701 263 aaKnown RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 HYAL2Q12891 473 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 DUSP8Q13202 625 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 BMPR2Q13873 1038 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ZNF460Q14592 562 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SF3B4Q15427 424 aaKnown RBP eCLIP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TGFBIQ15582 683 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TSNQ15631 228 aaKnown RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PHKG1Q16816 387 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ICE2Q659A1 982 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SULT1C3Q6IMI6 304 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CAPN13Q6MZZ7 669 aaPredicted RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 QSOX2Q6ZRP7 698 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CMC1Q7Z7K0 106 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ISCA2Q86U28 154 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 GPSM1Q86YR5 675 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 LRRC56Q8IYG6 542 aaPredicted RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 LRRC25Q8N386 305 aaPredicted RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 KCT2Q8NC54 265 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 OR56A3Q8NH54 315 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TM4SF19Q96DZ7 209 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TRMT61AQ96FX7 289 aaKnown RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SGCZQ96LD1 299 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 HAUS8Q9BT25 410 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SFXN3Q9BWM7 321 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CAPS2Q9BXY5 557 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 GRIP2Q9C0E4 1043 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CNOT10Q9H9A5 744 aaKnown RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ANKHQ9HCJ1 492 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 RRAGDQ9NQL2 400 aaPredicted RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CCDC177Q9NQR7 707 aaPredicted RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 NECTIN3Q9NQS3 549 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SACM1LQ9NTJ5 587 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ARGLU1Q9NWB6 273 aaPredicted RBP6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 QPCTLQ9NXS2 382 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 MYOTQ9UBF9 498 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 DCDC2Q9UHG0 476 aa6.54□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ADAMTS6Q9UKP5 1117 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms