RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ZCCHC3Q9NUD5 404 aaKnown RBP19.32■□□□□ 0.68
SSBP3-216ENST00000610401 CNOT2Q9NZN8 540 aaKnown RBP19.32■□□□□ 0.68
SSBP3-216ENST00000610401 LSM2Q9Y333 95 aaKnown RBP19.32■□□□□ 0.68
SSBP3-216ENST00000610401 REV3LO60673 3130 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 HYKKA2RU49 373 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 ERVH48-1M5A8F1 160 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 POP7O75817 140 aaKnown RBP19.31■□□□□ 0.68
SSBP3-216ENST00000610401 CHRNB1P11230 501 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
SSBP3-216ENST00000610401 GPR1P46091 355 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 CCT3P49368 545 aaKnown RBP19.31■□□□□ 0.68
SSBP3-216ENST00000610401 LIMK1P53667 647 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 CSTF1Q05048 431 aaKnown RBP19.31■□□□□ 0.68
SSBP3-216ENST00000610401 GPR19Q15760 415 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.31■□□□□ 0.68
SSBP3-216ENST00000610401 VN1R2Q8NFZ6 395 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 SLC25A19Q9HC21 320 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 CLCA2Q9UQC9 943 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 A0A1W2PPK0 400 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 SH3D21A4FU49 640 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 SLC16A5O15375 505 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 SLC2A10O95528 541 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 EIF2S1P05198 315 aaKnown RBP19.31■□□□□ 0.68
SSBP3-216ENST00000610401 IL12RB1P42701 662 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 PCBP3P57721 371 aaKnown RBP19.31■□□□□ 0.68
SSBP3-216ENST00000610401 HENMT1Q5T8I9 393 aaKnown RBP19.31■□□□□ 0.68
SSBP3-216ENST00000610401 REM2Q8IYK8 340 aaPredicted RBP19.31■□□□□ 0.68
SSBP3-216ENST00000610401 OR8J1Q8NGP2 316 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 OR51I1Q9H343 314 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 ASAH2Q9NR71 780 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 HCN2Q9UL51 889 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 HS3ST2Q9Y278 367 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 MRPS7Q9Y2R9 242 aaKnown RBP19.31■□□□□ 0.68
SSBP3-216ENST00000610401 PCDHGB2Q9Y5G2 931 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 BACE2Q9Y5Z0 518 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 ALG5Q9Y673 324 aa19.31■□□□□ 0.68
SSBP3-216ENST00000610401 SPTBP11277 2137 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 CACNA1CQ13936 2221 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 PRAMEF27A3QJZ7 478 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 LZTS3O60299 673 aaPredicted RBP19.3■□□□□ 0.68
SSBP3-216ENST00000610401 UGDHO60701 494 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 NXPE4Q6UWF7 544 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 FAM83HQ6ZRV2 1179 aaPredicted RBP19.3■□□□□ 0.68
SSBP3-216ENST00000610401 CPA6Q8N4T0 437 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 SLC25A46Q96AG3 418 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 FAM46AQ96IP4 442 aaKnown RBP19.3■□□□□ 0.68
SSBP3-216ENST00000610401 OSGEPL1Q9H4B0 414 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 MOSPD1Q9UJG1 213 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 TRAV6A0A075B6T7 132 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 SLC5A10A0PJK1 596 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 E9PQ18 207 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 HMGN4O00479 90 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 PDPK1O15530 556 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 OR1F1O43749 312 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 INHAP05111 366 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 C8AP07357 584 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 NR2F6P10588 404 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 POLR2EP19388 210 aaKnown RBP19.3■□□□□ 0.68
SSBP3-216ENST00000610401 LIMS1P48059 325 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 KRT74Q7RTS7 529 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 VN1R5Q7Z5H4 357 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 TMEM38AQ9H6F2 299 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 TRIM45Q9H8W5 580 aaPredicted RBP19.3■□□□□ 0.68
SSBP3-216ENST00000610401 B3GAT2Q9NPZ5 323 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 CSNK1G3Q9Y6M4 447 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 HMX3A6NHT5 357 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 YES1P07947 543 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 SYPP08247 313 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 CYP2A6P11509 494 aaPredicted RBP19.3■□□□□ 0.68
SSBP3-216ENST00000610401 GIPRP48546 466 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 CLDN2P57739 230 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 WSCD2Q2TBF2 565 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 SLC35F1Q5T1Q4 408 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 MARCH9Q86YJ5 346 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 BBS1Q8NFJ9 593 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 C16orf58Q96GQ5 468 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 ZNF582Q96NG8 517 aaPredicted RBP19.3■□□□□ 0.68
SSBP3-216ENST00000610401 CDCP1Q9H5V8 836 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 RETREG1Q9H6L5 497 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 C3orf14Q9HBI5 128 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 FBXW2Q9UKT8 454 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 KCNE3Q9Y6H6 103 aa19.3■□□□□ 0.68
SSBP3-216ENST00000610401 NPIPB8E9PQR5 432 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 GPR4P46093 362 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 DEFB103AP81534 67 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 FAM27D1Q5T7N8 215 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 LIPIQ6XZB0 460 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 RRM2BQ7LG56 351 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 CCDC116Q8IYX3 515 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 OR9A1PQ8NGU1 263 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 BBS10Q8TAM1 723 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 COL26A1Q96A83 441 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 ZBED6CLQ96FA7 236 aaPredicted RBP19.29■□□□□ 0.68
SSBP3-216ENST00000610401 SERHL2Q9H4I8 314 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 ELAC1Q9H777 363 aaKnown RBP19.29■□□□□ 0.68
SSBP3-216ENST00000610401 NDUFB11Q9NX14 153 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 TRIOO75962 3097 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 A0A075B6Q4 140 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 SHISA3A0PJX4 238 aa19.29■□□□□ 0.68
SSBP3-216ENST00000610401 C12orf71A8MTZ7 269 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms