RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 CSNK1DP48730 415 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 NCS1P62166 190 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 SELENOWP63302 87 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PUDPQ08623 228 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 ZNF761Q86XN6 746 aaPredicted RBP13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 CMKLR1Q99788 373 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 AGPAT4Q9NRZ5 378 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 SLX4Q8IY92 1834 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 HHLA1C9JL84 531 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 KCNJ13O60928 360 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PLGP00747 810 aaPredicted RBP13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PTPRRQ15256 657 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PDZD3Q86UT5 571 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 TRIM73Q86UV7 250 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 SLC44A3Q8N4M1 653 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 MFSD2AQ8NA29 543 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PROKR1Q8TCW9 393 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 EGLN2Q96KS0 407 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 BIRC8Q96P09 236 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 ORAI3Q9BRQ5 295 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 SORBS1Q9BX66 1292 aaKnown RBP13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 LHPPQ9H008 270 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PTGES2Q9H7Z7 377 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 TAS2R10Q9NYW0 307 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PCDHGB6Q9Y5F9 930 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 LRP5O75197 1615 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 A0A0G2JPF8 293 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 HNRNPCL3B7ZW38 293 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PLD2O14939 933 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 AK1P00568 194 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 HNRNPCL4P0DMR1 293 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 NFATC3Q12968 1075 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 VEZF1Q14119 521 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 SEC23BQ15437 767 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PLEKHG7Q6ZR37 379 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PAQR7Q86WK9 346 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 FAM86B1Q8N7N1 296 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 ZFP41Q8N8Y5 198 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 FAM46AQ96IP4 442 aaKnown RBP13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 MED11Q9P086 117 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 HCN2Q9UL51 889 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 A0A1W2PPK0 400 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 TCRBV3S1A0A5B6 114 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 OR2B3O76000 313 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 SPARCP09486 303 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 AK4P27144 223 aaPredicted RBP13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 MAZP56270 477 aaKnown RBP13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PRSS48Q7RTY5 328 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 TMPRSS9Q7Z410 1059 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 LSMEM2Q8N112 164 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 LINC01465Q8N7H1 131 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 PHOX2BQ99453 314 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 MAU2Q9Y6X3 613 aa13.56□□□□□ -0.24
PCDHB16-201ENST00000609684 RNASET2O00584 256 aaKnown RBP13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 PPM1BO75688 479 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 SEMA4FO95754 770 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 AOAHP28039 575 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 PDHA2P29803 388 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 GPR143P51810 404 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 HHEXQ03014 270 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 PLCXD2Q0VAA5 305 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 GAS6Q14393 721 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 DEFB110Q30KQ9 67 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 CPZQ66K79 652 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 RNF111Q6ZNA4 994 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 KLBQ86Z14 1044 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 THAP3Q8WTV1 239 aaPredicted RBP13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 GATA6Q92908 595 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 HS6ST2Q96MM7 605 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 NMNAT1Q9HAN9 279 aaPredicted RBP13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 M0R3H8 397 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 GADD45AP24522 165 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 CERS1P27544 350 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 ACTC1P68032 377 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 ACTA1P68133 377 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 SEMA3BQ13214 749 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 MAB21L1Q13394 359 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 LCTLQ6UWM7 567 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 CEACAM19Q7Z692 300 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 NRMQ8IXM6 262 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 IQCF1Q8N6M8 205 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 PEX11GQ96HA9 241 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 BEX2Q9BXY8 128 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 BEX1Q9HBH7 125 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 KLHL42Q9P2K6 505 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 SOBPA7XYQ1 873 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 TRAPPC6AO75865 159 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 PCGF2P35227 344 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 GPAT4Q86UL3 456 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 ACBD7Q8N6N7 88 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 ASB11Q8WXH4 323 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 TMEM234Q8WY98 164 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 SGTBQ96EQ0 304 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 CLCC1Q96S66 551 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 RMI1Q9H9A7 625 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 GPR52Q9Y2T5 361 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 LSM1O15116 133 aaKnown RBP13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 LBX1P52954 281 aa13.55□□□□□ -0.24
PCDHB16-201ENST00000609684 PIN1Q13526 163 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms