RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 ZNF860A6NHJ4 632 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PRR33A8MZF0 331 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HNRNPCL2B2RXH8 293 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HNRNPCL3B7ZW38 293 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 UPK1AO00322 258 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 GCM2O75603 506 aaPredicted RBP11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SERPINB7O75635 380 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PGM3O95394 542 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MED26O95402 600 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HPRP00739 348 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 C1QCP02747 245 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HNRNPCL4P0DMR1 293 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF26P17031 533 aaPredicted RBP11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ITGA2P17301 1181 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CKMT2P17540 419 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MC3RP41968 323 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MAN2A2P49641 1150 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CRYBA2P53672 197 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OLR1P78380 273 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CCL7P80098 99 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TAF11Q15544 211 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PRICKLE4Q2TBC4 344 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CYBRD1Q53TN4 286 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ATAD3BQ5T9A4 648 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LPCAT4Q643R3 524 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HEPHL1Q6MZM0 1159 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RHBDD2Q6NTF9 364 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MFSD12Q6NUT3 480 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF574Q6ZN55 896 aaPredicted RBP11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 QSOX2Q6ZRP7 698 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SLITRK4Q8IW52 837 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CLEC4FQ8N1N0 589 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR5T3Q8NGG3 340 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR1L3Q8NH93 324 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 NFKBIDQ8NI38 313 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 GEMIN6Q8WXD5 167 aaKnown RBP11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MMABQ96EY8 250 aaPredicted RBP11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 NAF1Q96HR8 494 aaKnown RBP11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF597Q96LX8 424 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TRNT1Q96Q11 434 aaKnown RBP11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TACO1Q9BSH4 297 aaKnown RBP11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SPRTNQ9H040 489 aaPredicted RBP11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SERHL2Q9H4I8 314 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 Q9H521 79 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 EVA1AQ9H8M9 152 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 POLE3Q9NRF9 147 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PRTFDC1Q9NRG1 225 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 DUSP22Q9NRW4 184 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 EXD2Q9NVH0 621 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SIDT1Q9NXL6 827 aaKnown RBP11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MAT2BQ9NZL9 334 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TMEM9Q9P0T7 183 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 KLHL3Q9UH77 587 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 BAG5Q9UL15 447 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RAB26Q9ULW5 256 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HCN4Q9Y3Q4 1203 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SEC16AO15027 2179 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 DSPPQ9NZW4 1301 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 D6RAR5 112 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CASC3O15234 703 aaKnown RBP11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LRP3O75074 770 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RASAL1O95294 804 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF682O95780 498 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CST1P01037 141 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FABP3P05413 133 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF806P0C7X5 589 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 C8orf89P0DMQ9 161 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FOLR1P15328 257 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RORAP35398 523 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MAP3K8P41279 467 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 STT3AP46977 705 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SEPHS1P49903 392 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 KCNJ10P78508 379 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 KCNC4Q03721 635 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 EPS8Q12929 822 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ILKQ13418 452 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 IL11RAQ14626 422 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 C16orf72Q14CZ0 275 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 GPR19Q15760 415 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 NKG7Q16617 165 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 IFI44LQ53G44 452 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FAM180BQ6P0A1 224 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TNFAIP8L2Q6P589 184 aaPredicted RBP11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZBTB49Q6ZSB9 765 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZDHHC21Q8IVQ6 265 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 KBTBD2Q8IY47 623 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FAM86B1Q8N7N1 296 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CDRT4Q8N9R6 151 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TMEM52Q8NDY8 209 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR7G2Q8NG99 324 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR51Q1Q8NH59 317 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OIT3Q8WWZ8 545 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MAL2Q969L2 176 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TAMM41Q96BW9 452 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TMEM19Q96HH6 336 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HSH2DQ96JZ2 352 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 GFM1Q96RP9 751 aaKnown RBP11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF347Q96SE7 839 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TGIF2Q9GZN2 237 aa11.51□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ARRDC1-AS1Q9H2J1 176 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms