RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 ZNF382Q96SR6 550 aa11.28□□□□□ -0.6
ZNF548-209ENST00000598895 CDRT15Q96T59 188 aa11.28□□□□□ -0.6
ZNF548-209ENST00000598895 ZNF696Q9H7X3 374 aa11.28□□□□□ -0.6
ZNF548-209ENST00000598895 MID1IP1Q9NPA3 183 aa11.28□□□□□ -0.6
ZNF548-209ENST00000598895 ANKRD10Q9NXR5 420 aa11.28□□□□□ -0.6
ZNF548-209ENST00000598895 SUCOQ9UBS9 1254 aaKnown RBP11.28□□□□□ -0.6
ZNF548-209ENST00000598895 B3GNT3Q9Y2A9 372 aa11.28□□□□□ -0.6
ZNF548-209ENST00000598895 ATG4BQ9Y4P1 393 aa11.28□□□□□ -0.6
ZNF548-209ENST00000598895 CLDN16Q9Y5I7 305 aa11.28□□□□□ -0.6
ZNF548-209ENST00000598895 COL6A6A6NMZ7 2263 aa11.28□□□□□ -0.6
ZNF548-209ENST00000598895 KALRNO60229 2985 aa11.28□□□□□ -0.6
ZNF548-209ENST00000598895 BOD1L1Q8NFC6 3051 aa11.27□□□□□ -0.6
ZNF548-209ENST00000598895 A0A0A6YYD5 115 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 PRSS51A0A1B0GVH4 220 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 DYTNA2CJ06 578 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 SAGE2PA6NJ88 616 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 FGF17O60258 216 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 CTNSO60931 367 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 SORBS2O94875 1100 aaKnown RBP11.27□□□□□ -0.61
ZNF548-209ENST00000598895 MLYCDO95822 493 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 CLPTM1O96005 669 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 KLK1P06870 262 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 FAM58BPP0C7Q3 252 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 TNNI3P19429 210 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 ERFP50548 548 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 FOXA1P55317 472 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 TNFRSF17Q02223 184 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 GALNT1Q10472 559 aaPredicted RBP11.27□□□□□ -0.61
ZNF548-209ENST00000598895 LCP2Q13094 533 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 ABHD17BQ5VST6 288 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 IGFL2Q6UWQ7 119 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 CUZD1Q86UP6 607 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 BEST3Q8N1M1 668 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 ZCCHC7Q8N3Z6 543 aaKnown RBP11.27□□□□□ -0.61
ZNF548-209ENST00000598895 CISD2Q8N5K1 135 aaKnown RBP11.27□□□□□ -0.61
ZNF548-209ENST00000598895 NFAM1Q8NET5 270 aaPredicted RBP11.27□□□□□ -0.61
ZNF548-209ENST00000598895 THAP3Q8WTV1 239 aaPredicted RBP11.27□□□□□ -0.61
ZNF548-209ENST00000598895 RCN3Q96D15 328 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 MAELQ96JY0 434 aaKnown RBP11.27□□□□□ -0.61
ZNF548-209ENST00000598895 NPAS2Q99743 824 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 TRMOQ9BU70 441 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 ALOXE3Q9BYJ1 711 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 MMP25Q9NPA2 562 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 STMN3Q9NZ72 180 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 PHF11Q9UIL8 331 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 RIMS3Q9UJD0 308 aa11.27□□□□□ -0.61
ZNF548-209ENST00000598895 SMG1Q96Q15 3661 aaKnown RBP11.27□□□□□ -0.61
ZNF548-209ENST00000598895 TRBV11-1A0A0K0K1C0 115 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 A0A1W2PR48 441 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 DNAJA2O60884 412 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 CRCPO75575 148 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 WDPCPO95876 746 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 KRT6AP02538 564 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 KRT6BP04259 564 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 CHRNGP07510 517 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 TPP2P29144 1249 aaPredicted RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 EPHA3P29320 983 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 TSFMP43897 325 aaKnown RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 KRT6CP48668 564 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 ATP4BP51164 291 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 PKNOX1P55347 436 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 INPP5JQ15735 1006 aaPredicted RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 ACER2Q5QJU3 275 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 CCNYL2Q5T2Q4 361 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 HACD2Q6Y1H2 254 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 Q6ZS92 163 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 COMMD6Q7Z4G1 85 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 SPATA24Q86W54 205 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 TICAM1Q8IUC6 712 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 C1orf52Q8N6N3 182 aaKnown RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 BHLHE22Q8NFJ8 381 aaPredicted RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 OR1N1Q8NGS0 311 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 CPT1CQ8TCG5 803 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 ELP5Q8TE02 316 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 ANKRD9Q96BM1 317 aaPredicted RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 PPWD1Q96BP3 646 aaKnown RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 ASB9Q96DX5 294 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 C19orf60Q96EN9 201 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 DUS3LQ96G46 650 aaKnown RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 LMF1Q96S06 567 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 NUF2Q9BZD4 464 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 CDCP1Q9H5V8 836 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 WDR55Q9H6Y2 383 aaPredicted RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 RPF2Q9H7B2 306 aaKnown RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 DDX31Q9H8H2 851 aaKnown RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 TNFRSF12AQ9NP84 129 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 LYARQ9NX58 379 aaKnown RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 TEX10Q9NXF1 929 aaPredicted RBP11.26□□□□□ -0.61
ZNF548-209ENST00000598895 ZDHHC2Q9UIJ5 367 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 FIS1Q9Y3D6 152 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 ASB4Q9Y574 426 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 AP4B1Q9Y6B7 739 aa11.26□□□□□ -0.61
ZNF548-209ENST00000598895 CFAP46Q8IYW2 2715 aa11.25□□□□□ -0.61
ZNF548-209ENST00000598895 A0A1W2PS29 197 aa11.25□□□□□ -0.61
ZNF548-209ENST00000598895 CFLARO15519 480 aa11.25□□□□□ -0.61
ZNF548-209ENST00000598895 PROM1O43490 865 aa11.25□□□□□ -0.61
ZNF548-209ENST00000598895 ULK1O75385 1050 aa11.25□□□□□ -0.61
ZNF548-209ENST00000598895 SEMA3DO95025 777 aa11.25□□□□□ -0.61
ZNF548-209ENST00000598895 ZIC2O95409 532 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms