RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 RP9Q8TA86 221 aaKnown RBP3.9□□□□□ -1.79
LINC00649-204ENST00000593977 HDAC7Q8WUI4 952 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 TSEN15Q8WW01 171 aaKnown RBP3.9□□□□□ -1.79
LINC00649-204ENST00000593977 NEU4Q8WWR8 484 aaPredicted RBP3.9□□□□□ -1.79
LINC00649-204ENST00000593977 OR1E3Q8WZA6 343 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 GGHQ92820 318 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 FGF13Q92913 245 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 PGBD1Q96JS3 809 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 FAM71F1Q96KD3 344 aaPredicted RBP3.9□□□□□ -1.79
LINC00649-204ENST00000593977 ART5Q96L15 291 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 GFI1Q99684 422 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 SH3GL1Q99961 368 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 TDRD1Q9BXT4 1180 aaKnown RBP3.9□□□□□ -1.79
LINC00649-204ENST00000593977 ADGRE3Q9BY15 652 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 API5Q9BZZ5 524 aaKnown RBP3.9□□□□□ -1.79
LINC00649-204ENST00000593977 SLC39A8Q9C0K1 460 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 WWP1Q9H0M0 922 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 RHBGQ9H310 441 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 DPAGT1Q9H3H5 408 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 MAGIXQ9H6Y5 334 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 COG4Q9H9E3 785 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 CDH20Q9HBT6 801 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 TREM1Q9NP99 234 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 RHCGQ9UBD6 479 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 NDRG3Q9UGV2 375 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 TNNQ9UQP3 1299 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 B3GALT5Q9Y2C3 310 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 IFT52Q9Y366 437 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 AKAP9Q99996 3911 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF532Q9HCE3 1301 aa3.9□□□□□ -1.79
LINC00649-204ENST00000593977 CEP192Q8TEP8 1941 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 NOTCH4Q99466 2003 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 FLNAP21333 2647 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 HEATR9A2RTY3 570 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 TMEM202A6NGA9 273 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 WASH3PC4AMC7 463 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 PDXKO00764 312 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 ABCD4O14678 606 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 RNF13O43567 381 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 OR10H2O60403 315 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 KCNJ13O60928 360 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 SERPINI2O75830 405 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 STBD1O95210 358 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 SMC2O95347 1197 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 TTLL1O95922 423 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 HLA-EP13747 358 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 B4GALT1P15291 398 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 SRMP19623 302 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 PCMT1P22061 227 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 UBA1P22314 1058 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 S100A5P33763 92 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 PTGFRP43088 359 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 RPS5P46782 204 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 ME1P48163 572 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 MYL6P60660 151 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 SNRPEP62304 92 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 TPM4P67936 248 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 CCZ1BP86790 482 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 CCZ1P86791 482 aaPredicted RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 PDE1BQ01064 536 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 ITGADQ13349 1161 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 LAMB3Q13751 1172 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 NR1D2Q14995 579 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 RBBP5Q15291 538 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 TRIP10Q15642 601 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 ACKR1Q16570 336 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 HSDL1Q3SXM5 330 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 SBK1Q52WX2 424 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 CMPK2Q5EBM0 449 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 FAM166AQ6J272 317 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 CBLN3Q6UW01 205 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 Q6ZSN1 163 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 SLC24A5Q71RS6 500 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 TMPRSS11BQ86T26 416 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 FAM131BQ86XD5 332 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 LRRC75A-AS1Q8N1F1 130 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 THEM5Q8N1Q8 247 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 GPR137CQ8N3F9 429 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 PAQR4Q8N4S7 273 aaPredicted RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 SIDT2Q8NBJ9 832 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 CPEB3Q8NE35 698 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 SPATA4Q8NEY3 305 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 MYCBPAPQ8TBZ2 947 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 PNPT1Q8TCS8 783 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 ACMSDQ8TDX5 336 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 SAP25Q8TEE9 199 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 CHPT1Q8WUD6 406 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 ANKRD7Q92527 254 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 HAS2Q92819 552 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 EMG1Q92979 244 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 HAVCR1Q96D42 359 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 PTCD3Q96EY7 689 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF48Q96MX3 618 aaPredicted RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 CCNL2Q96S94 520 aaPredicted RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 MTERF1Q99551 399 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 UQCC2Q9BRT2 126 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 MMTAG2Q9BU76 263 aaKnown RBP3.89□□□□□ -1.79
LINC00649-204ENST00000593977 FNDC11Q9BVV2 318 aa3.89□□□□□ -1.79
LINC00649-204ENST00000593977 NUSAP1Q9BXS6 441 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms