RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 WNT3P56703 355 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 PHEXP78562 749 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 DUSP8Q13202 625 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 ZNF267Q14586 743 aaPredicted RBP13.53□□□□□ -0.24
PNKP-202ENST00000593706 EBPQ15125 230 aaKnown RBP13.53□□□□□ -0.24
PNKP-202ENST00000593706 SPRED3Q2MJR0 410 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 ACSF3Q4G176 576 aaPredicted RBP13.53□□□□□ -0.24
PNKP-202ENST00000593706 C18orf63Q68DL7 685 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 LYPD8Q6UX82 237 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 TIFABQ6ZNK6 161 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 TAOK1Q7L7X3 1001 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 GOLGA7Q7Z5G4 137 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 CDC20BQ86Y33 519 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 TAGAPQ8N103 731 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 RNF175Q8N4F7 328 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 PTGR2Q8N8N7 351 aaPredicted RBP13.53□□□□□ -0.24
PNKP-202ENST00000593706 L3MBTL4Q8NA19 623 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 HUS1BQ8NHY5 278 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 DIO2Q92813 273 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 RNASE6Q93091 150 aaKnown RBP13.53□□□□□ -0.24
PNKP-202ENST00000593706 TRIM44Q96DX7 344 aaPredicted RBP13.53□□□□□ -0.24
PNKP-202ENST00000593706 HSPBAP1Q96EW2 488 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 SH3GL2Q99962 352 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 RHOXF2Q9BQY4 288 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 ZNF717Q9BY31 904 aaPredicted RBP13.53□□□□□ -0.24
PNKP-202ENST00000593706 ADGRE2Q9UHX3 823 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 ANGPTL3Q9Y5C1 460 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 EXOC1LA0A1B0GW35 172 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 OR6C76A6NM76 312 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 POC1B-GALNT4F8VUJ3 575 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 STX16-NPEPL1H3BU86 382 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 PLPP1O14494 284 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 OR7A17O14581 309 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 STX16O14662 325 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 TP53I11O14683 189 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 TRAPPC6AO75865 159 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 NR2F6P10588 404 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 MASP1P48740 699 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 HNRNPH2P55795 449 aaKnown RBP13.52□□□□□ -0.25
PNKP-202ENST00000593706 FOXD4Q12950 439 aaPredicted RBP13.52□□□□□ -0.25
PNKP-202ENST00000593706 GTF2H2Q13888 395 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 RPS6KA2Q15349 733 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 TOMM20Q15388 145 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 NTRK2Q16620 822 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 TSNAXIP1Q2TAA8 658 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 TBCELQ5QJ74 424 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 DEPDC1Q5TB30 811 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 LIPJQ5W064 366 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 TMEM198Q66K66 360 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 GTF2H2CQ6P1K8 395 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 CYP20A1Q6UW02 462 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 SEM1Q6ZVN7 128 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 LACC1Q8IV20 430 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 GSPT2Q8IYD1 628 aaKnown RBP13.52□□□□□ -0.25
PNKP-202ENST00000593706 ZCCHC7Q8N3Z6 543 aaKnown RBP13.52□□□□□ -0.25
PNKP-202ENST00000593706 EIF1ADQ8N9N8 165 aaKnown RBP13.52□□□□□ -0.25
PNKP-202ENST00000593706 NAXEQ8NCW5 288 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 TNIP2Q8NFZ5 429 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 MZB1Q8WU39 189 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 FAM222BQ8WU58 562 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 RIT1Q92963 219 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 ALPK1Q96QP1 1244 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 MTERF1Q99551 399 aaKnown RBP13.52□□□□□ -0.25
PNKP-202ENST00000593706 WDR41Q9HAD4 459 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 PROK2Q9HC23 129 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 LYARQ9NX58 379 aaKnown RBP13.52□□□□□ -0.25
PNKP-202ENST00000593706 CPSF2Q9P2I0 782 aaKnown RBP13.52□□□□□ -0.25
PNKP-202ENST00000593706 FETUBQ9UGM5 382 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 PCTPQ9UKL6 214 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 CNOT11Q9UKZ1 510 aaKnown RBP13.52□□□□□ -0.25
PNKP-202ENST00000593706 CBLCQ9ULV8 474 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 CAMK2AQ9UQM7 478 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 TNPO3Q9Y5L0 923 aaKnown RBP13.52□□□□□ -0.25
PNKP-202ENST00000593706 IKBKGQ9Y6K9 419 aa13.52□□□□□ -0.25
PNKP-202ENST00000593706 GLOD5A6NK44 160 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 CAPN14A8MX76 684 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 SYT5O00445 386 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 PROM1O43490 865 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 IL2RAP01589 272 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 RPS17P08708 135 aaKnown RBP13.51□□□□□ -0.25
PNKP-202ENST00000593706 SNRPAP09012 282 aaKnown RBP13.51□□□□□ -0.25
PNKP-202ENST00000593706 RBP1P09455 135 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 DRD2P14416 443 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 PIK3CGP48736 1102 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 TMED10P49755 219 aaKnown RBP13.51□□□□□ -0.25
PNKP-202ENST00000593706 SLC37A1P57057 533 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 CRYZQ08257 329 aaKnown RBP13.51□□□□□ -0.25
PNKP-202ENST00000593706 TRAF3Q13114 568 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 SF3B4Q15427 424 aaKnown RBP eCLIP13.51□□□□□ -0.254e-8■■■■□ 20.8
PNKP-202ENST00000593706 HLA-DQA1Q5Y7H0 255 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 PAMR1Q6UXH9 720 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 PM20D2Q8IYS1 436 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 OR52B6Q8NGF0 335 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 WDR20Q8TBZ3 569 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 RILPQ96NA2 401 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 NSUN5Q96P11 429 aaKnown RBP13.51□□□□□ -0.25
PNKP-202ENST00000593706 MRPL57Q9BQC6 102 aaKnown RBP13.51□□□□□ -0.25
PNKP-202ENST00000593706 C1QTNF3Q9BXJ4 246 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 MRPL46Q9H2W6 279 aaKnown RBP13.51□□□□□ -0.25
PNKP-202ENST00000593706 IPPKQ9H8X2 491 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms