RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ZNF780BQ9Y6R6 833 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 CHD9Q3L8U1 2897 aa18.08■□□□□ 0.48
PRKCSH-209ENST00000589838 PROM1O43490 865 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 ADAM23O75077 832 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 STATHP02808 62 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 RPLP0P05388 317 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 ASGR2P07307 311 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 ACADMP11310 421 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 F3P13726 295 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 PPP2CBP62714 309 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 PPP2CAP67775 309 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 ITGADQ13349 1161 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 GPR19Q15760 415 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 TMEM236Q5W0B7 351 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 IGFN1Q86VF2 1251 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 PAQR7Q86WK9 346 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 NRROSQ86YC3 692 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 OR4E2Q8NGC2 313 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 OR6Q1Q8NGQ2 317 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 CHPT1Q8WUD6 406 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 GAL3ST3Q96A11 431 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 CNRIP1Q96F85 164 aaPredicted RBP18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 PINK1Q9BXM7 581 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 TBC1D29Q9UFV1 150 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 APOBEC3BQ9UH17 382 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 OSGIN1Q9UJX0 560 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 MDC1Q14676 2089 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 C4orf51C9J302 202 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 HMGN2P05204 90 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 ADORA3P0DMS8 318 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 COL9A1P20849 921 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 FUT4P22083 530 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 CERS1P27544 350 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 XKP51811 444 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 ALDH6A1Q02252 535 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 LASP1Q14847 261 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 SEC23BQ15437 767 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 PGBD2Q6P3X8 592 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 CASP12Q6UXS9 341 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 DCDC5Q6ZRR9 648 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 USP43Q70EL4 1123 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 OR4D11Q8NGI4 311 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 FUZQ9BT04 418 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 S1PR5Q9H228 398 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 SRMSQ9H3Y6 488 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 KCNK12Q9HB15 430 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 PCOLCE2Q9UKZ9 415 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 A4GNTQ9UNA3 340 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 LIPT1Q9Y234 373 aa18.07■□□□□ 0.48
PRKCSH-209ENST00000589838 WASHC1A8K0Z3 465 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 ASNA1O43681 348 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 PRKRAO75569 313 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 LGI1O95970 557 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 OCM2P0CE71 109 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 OCMP0CE72 109 aaPredicted RBP18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 RAB8AP61006 207 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 ADAM15Q13444 863 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 CEBPEQ15744 281 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 GPAT3Q53EU6 434 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 MEDAGQ5VYS4 303 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 PLAG1Q6DJT9 500 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 CD300LDQ6UXZ3 194 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 RBM45Q8IUH3 476 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 SAMD14Q8IZD0 417 aaPredicted RBP18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 KBTBD8Q8NFY9 601 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 NT5CQ8TCD5 201 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 OR1E3Q8WZA6 343 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 RPL3LQ92901 407 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 RSPO3Q9BXY4 272 aaPredicted RBP18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 DCSTAMPQ9H295 470 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 TRIM45Q9H8W5 580 aaPredicted RBP18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 KLF15Q9UIH9 416 aa18.06■□□□□ 0.48
PRKCSH-209ENST00000589838 POM121BA6NF01 834 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 H3BN98 237 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 RFXAPO00287 272 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 KPNA4O00629 521 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 TOR1BO14657 336 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 TNFRSF10CO14798 259 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 SEMA7AO75326 666 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 NME6O75414 186 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 SULT1C4O75897 302 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 EGFP01133 1207 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 HOXB3P14651 431 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 CTHP32929 405 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 FEN1P39748 380 aaKnown RBP18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 RANBP1P43487 201 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 BTN3A2P78410 334 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 TARDBPQ13148 414 aaKnown RBP eCLIP18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 KIR2DS3Q14952 304 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 ARMCX4Q5H9R4 360 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 TMEM201Q5SNT2 666 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 C18orf63Q68DL7 685 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 C12orf73Q69YU5 71 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 ASPGQ86U10 573 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 NUP43Q8NFH3 380 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 PRRC1Q96M27 445 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 SNRNP200O75643 2136 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms