RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 SERHL2Q9H4I8 314 aa11.33□□□□□ -0.6
CCBE1-203ENST00000589116 CUTCQ9NTM9 273 aa11.33□□□□□ -0.6
CCBE1-203ENST00000589116 P2RX2Q9UBL9 471 aa11.33□□□□□ -0.6
CCBE1-203ENST00000589116 DNAJB9Q9UBS3 223 aa11.33□□□□□ -0.6
CCBE1-203ENST00000589116 LRCH1Q9Y2L9 728 aa11.33□□□□□ -0.6
CCBE1-203ENST00000589116 ASXL3Q9C0F0 2248 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 A0A087WV62 115 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.32□□□□□ -0.6
CCBE1-203ENST00000589116 GCM2O75603 506 aaPredicted RBP11.32□□□□□ -0.6
CCBE1-203ENST00000589116 PDE9AO76083 593 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 TFPTP0C1Z6 253 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 ZNF26P17031 533 aaPredicted RBP11.32□□□□□ -0.6
CCBE1-203ENST00000589116 MATN1P21941 496 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 GCGRP47871 477 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 CLCN2P51788 898 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 CRYBA2P53672 197 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 AQP4P55087 323 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 ITGA1P56199 1179 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 RPS26P62854 115 aaKnown RBP11.32□□□□□ -0.6
CCBE1-203ENST00000589116 DAB2P98082 770 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 KCNAB1Q14722 419 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 GPR19Q15760 415 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 CYBRD1Q53TN4 286 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 SNAP47Q5SQN1 464 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 ZC3H7AQ8IWR0 971 aaKnown RBP11.32□□□□□ -0.6
CCBE1-203ENST00000589116 LGI4Q8N135 537 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 OR2L13Q8N349 312 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 TMEM52Q8NDY8 209 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 MMABQ96EY8 250 aaPredicted RBP11.32□□□□□ -0.6
CCBE1-203ENST00000589116 NAF1Q96HR8 494 aaKnown RBP11.32□□□□□ -0.6
CCBE1-203ENST00000589116 HSH2DQ96JZ2 352 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 CIB1Q99828 191 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 DOHHQ9BU89 302 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 GTPBP2Q9BX10 602 aaKnown RBP11.32□□□□□ -0.6
CCBE1-203ENST00000589116 LRRN3Q9H3W5 708 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 IL1RAPQ9NPH3 570 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 DDX18Q9NVP1 670 aaKnown RBP11.32□□□□□ -0.6
CCBE1-203ENST00000589116 SERTAD3Q9UJW9 196 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 CDC14AQ9UNH5 594 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 PCDHGB2Q9Y5G2 931 aa11.32□□□□□ -0.6
CCBE1-203ENST00000589116 A0A1W2PQM1 296 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 FAM149AA5PLN7 773 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 CLDN4O14493 209 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 KHNYNO15037 678 aaKnown RBP11.31□□□□□ -0.6
CCBE1-203ENST00000589116 LDB3O75112 727 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 AGR2O95994 175 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 CST1P01037 141 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 MT-ND1P03886 318 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 HMGN2P05204 90 aaKnown RBP11.31□□□□□ -0.6
CCBE1-203ENST00000589116 RPLP0P05388 317 aaKnown RBP11.31□□□□□ -0.6
CCBE1-203ENST00000589116 BCHEP06276 602 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 SLC35E2P0CK97 266 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 FOLR1P15328 257 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 AQP1P29972 269 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 ARSFP54793 590 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 SELENOWP63302 87 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 CCL7P80098 99 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 ACY1Q03154 408 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 LASP1Q14847 261 aaKnown RBP11.31□□□□□ -0.6
CCBE1-203ENST00000589116 LTB4RQ15722 352 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 LPAL2Q16609 132 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 ZNF628Q5EBL2 1059 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 PRAMEF8Q5VWM4 474 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 PRAMEF7Q5VXH5 474 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 PPP4R4Q6NUP7 873 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 ZBTB49Q6ZSB9 765 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 MED25Q71SY5 747 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 PIWIL3Q7Z3Z3 882 aaKnown RBP11.31□□□□□ -0.6
CCBE1-203ENST00000589116 ARHGAP22Q7Z5H3 698 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 ZDHHC21Q8IVQ6 265 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 OR4N5Q8IXE1 308 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 OR2I1PQ8NGU4 316 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 SLC38A5Q8WUX1 472 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 ANKRD9Q96BM1 317 aaPredicted RBP11.31□□□□□ -0.6
CCBE1-203ENST00000589116 TMEM19Q96HH6 336 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 MAGED4Q96JG8 741 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 COQ10BQ9H8M1 238 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 PARD6AQ9NPB6 346 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 HCN3Q9P1Z3 774 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 TRPC4Q9UBN4 977 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 ZNF639Q9UID6 485 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 RAB23Q9ULC3 237 aa11.31□□□□□ -0.6
CCBE1-203ENST00000589116 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 DUXAA6NLW8 204 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 A8MU76 341 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 FAM227AF5H4B4 570 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 M0QX08 132 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 UPK1AO00322 258 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 PLOD3O60568 738 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 CTNSO60931 367 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 FABP3P05413 133 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 OR12D1P0DN82 309 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 TGM1P22735 817 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 CRISP3P54108 245 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 PRKAG1P54619 331 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 HSD17B7P56937 341 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 IGLV3-21P80748 117 aaPredicted RBP11.3□□□□□ -0.6
CCBE1-203ENST00000589116 SPEM2Q0P670 501 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 BIKQ13323 160 aa11.3□□□□□ -0.6
CCBE1-203ENST00000589116 GALNT10Q86SR1 603 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms