RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 DDX39BQ13838 428 aaKnown RBP7.35□□□□□ -1.23
VMP1-204ENST00000587259 CEACAM7Q14002 265 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 PTGR1Q14914 329 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 CDSNQ15517 529 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 NKG7Q16617 165 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 MUM1Q2TAK8 710 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 TMEM35AQ53FP2 167 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 CMPK2Q5EBM0 449 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 C6orf10Q5SRN2 563 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 AGAP7PQ5VUJ5 663 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 ICE2Q659A1 982 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 FCRL6Q6DN72 434 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 FAAH2Q6GMR7 532 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 LCN8Q6JVE9 175 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 MYO7BQ6PIF6 2116 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 LRRC74BQ6ZQY2 392 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 NCCRP1Q6ZVX7 275 aaPredicted RBP7.35□□□□□ -1.23
VMP1-204ENST00000587259 DHFR2Q86XF0 187 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 MCATQ8IVS2 390 aaKnown RBP7.35□□□□□ -1.23
VMP1-204ENST00000587259 SHISA5Q8N114 240 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 SIRT6Q8N6T7 355 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 LINC01555Q8NAE3 123 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 SRFBP1Q8NEF9 429 aaKnown RBP7.35□□□□□ -1.23
VMP1-204ENST00000587259 BHLHE22Q8NFJ8 381 aaPredicted RBP7.35□□□□□ -1.23
VMP1-204ENST00000587259 OR11G2Q8NGC1 345 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 OR8J2Q8NGG1 315 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 ITLN2Q8WWU7 325 aaPredicted RBP7.35□□□□□ -1.23
VMP1-204ENST00000587259 TM9SF4Q92544 642 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 DUS3LQ96G46 650 aaKnown RBP7.35□□□□□ -1.23
VMP1-204ENST00000587259 ZNF764Q96H86 408 aaPredicted RBP7.35□□□□□ -1.23
VMP1-204ENST00000587259 AGAP4Q96P64 663 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 IP6K3Q96PC2 410 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 MTERF1Q99551 399 aaKnown RBP7.35□□□□□ -1.23
VMP1-204ENST00000587259 KCTD14Q9BQ13 255 aaPredicted RBP7.35□□□□□ -1.23
VMP1-204ENST00000587259 SLX1AQ9BQ83 275 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 NDC1Q9BTX1 674 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 MENTQ9BUN1 341 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 YY1AP1Q9H869 796 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 ZNF160Q9HCG1 818 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 SLC52A3Q9NQ40 469 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 C8orf4Q9NR00 106 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 OLAHQ9NV23 265 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 CD300AQ9UGN4 299 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 MCM8Q9UJA3 840 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 ADAM29Q9UKF5 820 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 PCDHA9Q9Y5H5 950 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 SNX13Q9Y5W8 968 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 AP1M2Q9Y6Q5 423 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 DCHS2Q6V1P9 2916 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 CCDC168Q8NDH2 2452 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 HIVEP1P15822 2718 aa7.35□□□□□ -1.23
VMP1-204ENST00000587259 SETD2Q9BYW2 2564 aaPredicted RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 TRGV8A0A0C4DH27 118 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 A0A1B0GX78 115 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 TRBC2A0A5B9 178 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 PRORSD1PA6NEY8 169 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 EVPLLA8MZ36 301 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 C19orf84I3L1E1 186 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 NME4O00746 187 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 ACOT8O14734 319 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 SCAMP2O15127 329 aaKnown RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 PRAMEF4O60810 478 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 GUCY1B2O75343 617 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 CLEC3AO75596 197 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 ANP32DO95626 131 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 STSP08842 583 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 ANXA4P09525 319 aaPredicted RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 CDH1P12830 882 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 EDN3P14138 238 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 COX7A2P14406 83 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 MMP11P24347 488 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 MST1P26927 711 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 AHRP35869 848 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 ZFP36L2P47974 494 aaKnown RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 TDGF1P3P51864 188 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 NEK2P51955 445 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 SOX8P57073 446 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 RPS13P62277 151 aaKnown RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 SNRPNP63162 240 aaKnown RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 PMP22Q01453 160 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 CCNIQ14094 377 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 KIR2DS3Q14952 304 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 FXNQ16595 210 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 SPANXN4Q5MJ08 99 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 LRIF1Q5T3J3 769 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 PRAMEF9Q5VWM5 478 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 B3GNTL1Q67FW5 361 aaPredicted RBP7.34□□□□□ -1.23
VMP1-204ENST00000587259 ERICH5Q6P6B1 374 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 FAM180AQ6UWF9 173 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 SUSD1Q6UWL2 747 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 IGFL2Q6UWQ7 119 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 OVCH1Q7RTY7 1134 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 SPATA24Q86W54 205 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 NUDT13Q86X67 352 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 RIMKLAQ8IXN7 391 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 SLC15A3Q8IY34 581 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 SLC34A3Q8N130 599 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 METTL4Q8N3J2 472 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 TRIML2Q8N7C3 387 aa7.34□□□□□ -1.23
VMP1-204ENST00000587259 TRPV3Q8NET8 790 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms