RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 COL21A1Q96P44 957 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 MS4A4EQ96PG1 132 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 OR7D2Q96RA2 312 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 SPATA5L1Q9BVQ7 753 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 BTBD2Q9BX70 525 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 ACTRT3Q9BYD9 372 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 CHRNA10Q9GZZ6 450 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 DDX18Q9NVP1 670 aaKnown RBP20.92■□□□□ 0.94
CIRBP-208ENST00000586548 TUBA8Q9NY65 449 aaPredicted RBP20.92■□□□□ 0.94
CIRBP-208ENST00000586548 PTGFRNQ9P2B2 879 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 SEC14L3Q9UDX4 400 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 EPHA6Q9UF33 1036 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 CSNK1G3Q9Y6M4 447 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 EME2A4GXA9 379 aaPredicted RBP20.92■□□□□ 0.94
CIRBP-208ENST00000586548 RHPN2P1A8MT19 583 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 MITFO75030 526 aaPredicted RBP20.92■□□□□ 0.94
CIRBP-208ENST00000586548 PABPC4LP0CB38 370 aaKnown RBP20.92■□□□□ 0.94
CIRBP-208ENST00000586548 NR1H2P55055 460 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 SKP1P63208 163 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 PUM1Q14671 1186 aaKnown RBP eCLIP20.92■□□□□ 0.94
CIRBP-208ENST00000586548 OR4N5Q8IXE1 308 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 ATG16L2Q8NAA4 619 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 GIPC3Q8TF64 312 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 ZNF354BQ96LW1 612 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 EPB41L1Q9H4G0 881 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 NDUFA13Q9P0J0 144 aa20.92■□□□□ 0.94
CIRBP-208ENST00000586548 CCDC88CQ9P219 2028 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 A0A0G2JPF8 293 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 A0A1B0GVT2 93 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 HNRNPCL2B2RXH8 293 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 HNRNPCL3B7ZW38 293 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 SGK494L7N484 410 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 UGT2B11O75310 529 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 HNRNPCL4P0DMR1 293 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 RPS6KA3P51812 740 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 CDH12P55289 794 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 TPD52P55327 224 aaPredicted RBP20.91■□□□□ 0.94
CIRBP-208ENST00000586548 NDUFA9Q16795 377 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 C6orf132Q5T0Z8 1188 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 NIPAL1Q6NVV3 410 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 GALNT5Q7Z7M9 940 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 OR2L13Q8N349 312 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 COL26A1Q96A83 441 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 ZNF285Q96NJ3 590 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 CD180Q99467 661 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 ING2Q9H160 280 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 EQTNQ9NQ60 294 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 KRT84Q9NSB2 600 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 LIPT1Q9Y234 373 aa20.91■□□□□ 0.94
CIRBP-208ENST00000586548 A0A087WXM4 84 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 SMIM31A0A1B0GVY4 71 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 TRIM64CA6NLI5 447 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 BCKDKO14874 412 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 FGF17O60258 216 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 RDH16O75452 317 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 SLITRK5O94991 958 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 GPR75O95800 540 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 ATP1B1P05026 303 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 CTSBP07858 339 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 CHRM4P08173 479 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 IFI6P09912 130 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 MLLT3P42568 568 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-208ENST00000586548 YAP1P46937 504 aaKnown RBP20.9■□□□□ 0.94
CIRBP-208ENST00000586548 GABRA4P48169 554 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 PPM1FP49593 454 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-208ENST00000586548 GFERP55789 205 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 ZNF691Q5VV52 312 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 FAM111BQ6SJ93 734 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 TMEM52Q8NDY8 209 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 OR9A4Q8NGU2 314 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 OTUB1Q96FW1 271 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-208ENST00000586548 ZDHHC12Q96GR4 267 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 TGM7Q96PF1 710 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 ANKRA2Q9H9E1 313 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 CALML5Q9NZT1 146 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 THEGQ9P2T0 379 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 KCND3Q9UK17 655 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 PLCL2Q9UPR0 1127 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 RNF215Q9Y6U7 377 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 COL6A3P12111 3177 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 J3KTA2 159 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 KIF1CO43896 1103 aaKnown RBP20.9■□□□□ 0.94
CIRBP-208ENST00000586548 CTSKP43235 329 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 LIMS1P48059 325 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 HMGA2P52926 109 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 GPAT3Q53EU6 434 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 ZNF628Q5EBL2 1059 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 ATAD3BQ5T9A4 648 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 MFSD12Q6NUT3 480 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 SATL1Q86VE3 508 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 TTC29Q8NA56 475 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-208ENST00000586548 TRNT1Q96Q11 434 aaKnown RBP20.9■□□□□ 0.94
CIRBP-208ENST00000586548 RSPO3Q9BXY4 272 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-208ENST00000586548 GRIP2Q9C0E4 1043 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 RIBC2Q9H4K1 309 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 ACER3Q9NUN7 267 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 LRIT1Q9P2V4 623 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 CLCA2Q9UQC9 943 aa20.9■□□□□ 0.94
CIRBP-208ENST00000586548 DUXAA6NLW8 204 aa20.89■□□□□ 0.93
CIRBP-208ENST00000586548 A8MVJ9 347 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms