RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	OR1D5	P58170	312 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ABCE1	P61221	599 aa	Known RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CCZ1B	P86790	482 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CCZ1	P86791	482 aa	Predicted RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	WASHC5	Q12768	1159 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	HNRNPD	Q14103	355 aa	Known RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	GCKR	Q14397	625 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	EXT1	Q16394	746 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	STX1A	Q16623	288 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	DUSP5	Q16690	384 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	RFTN2	Q52LD8	501 aa	Predicted RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CT45A2	Q5DJT8	189 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	TOR1AIP1	Q5JTV8	583 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FFAR4	Q5NUL3	377 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	BSPRY	Q5W0U4	402 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	TATDN1	Q6P1N9	297 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ARHGAP11A	Q6P4F7	1023 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ASPG	Q86U10	573 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ZSCAN30	Q86W11	494 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	NLRP14	Q86W24	1093 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SLC22A15	Q8IZD6	547 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ADAD2	Q8NCV1	583 aa	Known RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ANKRD20A12P	Q8NF67	263 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	C8orf46	Q8TAG6	207 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FAM151A	Q8WW52	585 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	HAS2	Q92819	552 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	NXPE2	Q96DL1	559 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	S1PR3	Q99500	378 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	DDX50	Q9BQ39	737 aa	Known RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SYT15	Q9BQS2	421 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CLEC7A	Q9BXN2	247 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SLC39A8	Q9C0K1	460 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ATG10	Q9H0Y0	220 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	GAN	Q9H2C0	597 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	MTIF3	Q9H2K0	278 aa	Known RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	C5orf66	Q9H5L9	145 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	UBE2T	Q9NPD8	197 aa	Predicted RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ZCCHC3	Q9NUD5	404 aa	Known RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ATAD3A	Q9NVI7	634 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	TMOD2	Q9NZR1	351 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ZNF319	Q9P2F9	582 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PPP1R3C	Q9UQK1	317 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PPP2R2C	Q9Y2T4	447 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CDK5RAP2	Q96SN8	1893 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	BPTF	Q12830	3046 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FRY	Q5TBA9	3013 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	DSP	P15924	2871 aa	Known RBP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	USP24	Q9UPU5	2620 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	IGKV3D-15	A0A087WSY6	115 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SMIM30	A4D0T7	59 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	GTPBP10	A4D1E9	387 aa	Known RBP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ARHGAP42	A6NI28	874 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SLC15A5	A6NIM6	579 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	KPNA7	A9QM74	516 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754		H3BMM5	538 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SLC28A1	O00337	649 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FPGT	O14772	594 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CHUK	O15111	745 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ACSL4	O60488	711 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SEC22B	O75396	215 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ABHD2	P08910	425 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	DLAT	P10515	647 aa	Known RBP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SKIL	P12757	684 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	AREG	P15514	252 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ACKR3	P25106	362 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	DUT	P33316	252 aa	Known RBP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FEN1	P39748	380 aa	Known RBP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	LEPR	P48357	1165 aa	Known RBP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	UCP2	P55851	309 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	HSPA14	Q0VDF9	509 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	TCP10	Q12799	353 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	GPR50	Q13585	617 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	GAMT	Q14353	236 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CCL14	Q16627	93 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CCDC40	Q4G0X9	1142 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CDC42EP5	Q6NZY7	148 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	NEK5	Q6P3R8	708 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CNTN4	Q8IWV2	1026 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FBXW8	Q8N3Y1	598 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	COLGALT1	Q8NBJ5	622 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	NUP37	Q8NFH4	326 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	OR5M9	Q8NGP3	310 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	EXOC6	Q8TAG9	804 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SPATA18	Q8TC71	538 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SMAP2	Q8WU79	429 aa	Predicted RBP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SLC13A3	Q8WWT9	602 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	BAD	Q92934	168 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SLCO4A1	Q96BD0	722 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	BPIFA2	Q96DR5	249 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CDHR1	Q96JP9	859 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FSD1	Q9BTV5	496 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PAPOLG	Q9BWT3	736 aa	Known RBP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PUS3	Q9BZE2	481 aa	Known RBP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	WWTR1	Q9GZV5	400 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ZDHHC18	Q9NUE0	388 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PLEK2	Q9NYT0	353 aa		3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	AKAP7	Q9P0M2	348 aa	Predicted RBP	3.14	□□□□□ -1.91
PPP4R1-229	ENST00000584754	VPS54	Q9P1Q0	977 aa		3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms