RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 IQCCQ4KMZ1 466 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 STEAP3Q658P3 488 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ENTHD1Q8IYW4 607 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CPXM2Q8N436 756 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 FBXL6Q8N531 539 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DENND6BQ8NEG7 585 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 FAM122AQ96E09 287 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 YIPF6Q96EC8 236 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 NRTNQ99748 197 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 COPS4Q9BT78 406 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 USE1Q9NZ43 259 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 B4GALT6Q9UBX8 382 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 KCND3Q9UK17 655 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TRBV5-3A0A0A0MS03 114 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 OTOL1A6NHN0 477 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 EPOPA6NHQ4 379 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 CCNKO75909 580 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 HLA-EP13747 358 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SERPINB1P30740 379 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 TIE1P35590 1138 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 NNMTP40261 264 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PREPP48147 710 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 TGM4P49221 684 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 RAC3P60763 192 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 GANABQ14697 944 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 C22orf39Q6P5X5 142 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 CERS6Q6ZMG9 384 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 CYP2U1Q7Z449 544 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 OR4K1Q8NGD4 311 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 OR5AK3PQ8NH89 298 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 FGF13Q92913 245 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 RSPRY1Q96DX4 576 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 COPS8Q99627 209 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SF3B5Q9BWJ5 86 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 HOXD1Q9GZZ0 328 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ADPRHL2Q9NX46 363 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SH3BP4Q9P0V3 963 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ACSL6Q9UKU0 697 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 MAN2B2Q9Y2E5 1009 aa11.02□□□□□ -0.65
CDK5RAP3-231ENST00000584063 WASH3PC4AMC7 463 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SLC16A6O15403 523 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 NOS1APO75052 506 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 KCNK2O95069 426 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 KCNK5O95279 499 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PLATP00750 562 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 RPS3P23396 243 aaKnown RBP eCLIP11.01□□□□□ -0.653e-10■■□□□ 13.8
CDK5RAP3-231ENST00000584063 KDELR2P33947 212 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 KIR3DL1P43629 444 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 GABARAPL2P60520 117 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 HNRNPKP61978 463 aaKnown RBP eCLIP11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 UBE3AQ05086 875 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 NPRL3Q12980 569 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 CHIT1Q13231 466 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 CAMK2GQ13555 558 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SLC9A5Q14940 896 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 HKDC1Q2TB90 917 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 MPP7Q5T2T1 576 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 C12orf40Q86WS4 652 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 CCDC103Q8IW40 242 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SFTPA1Q8IWL2 248 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 UBE2J2Q8N2K1 259 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 LHFPL5Q8TAF8 219 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 APH1BQ8WW43 257 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 USP7Q93009 1102 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 GTPBP3Q969Y2 492 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SPACA9Q96E40 222 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 FEVQ99581 238 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 OR10A4Q9H209 315 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 REEP1Q9H902 201 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 DIABLOQ9NR28 239 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 IFT52Q9Y366 437 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 MSRB2Q9Y3D2 182 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 COL6A3P12111 3177 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 A0A0A6YYJ9 748 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PNMA8CA0A1B0GUJ8 204 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SLC22A1O15245 554 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 LINC01565O15544 149 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ATG13O75143 517 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PSIP1O75475 530 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ALX3O95076 343 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ANXA5P08758 320 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 AZGP1P25311 298 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 TGFBR2P37173 567 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SLC6A11P48066 632 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 FAM78AQ5JUQ0 283 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 KDM4DQ6B0I6 523 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 NOXRED1Q6NXP6 359 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 OR9Q2Q8NGE9 314 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ZDHHC12Q96GR4 267 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 KCNH6Q9H252 994 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 DUSP21Q9H596 190 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 IL1RAPQ9NPH3 570 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 ERVK13-1Q9NX77 482 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 RNF6Q9Y252 685 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 SDK1Q7Z5N4 2213 aa11.01□□□□□ -0.65
CDK5RAP3-231ENST00000584063 hCG_1807616A0A1W2PRN6 198 aa11□□□□□ -0.65
CDK5RAP3-231ENST00000584063 FAM220BPB1ANY3 271 aa11□□□□□ -0.65
CDK5RAP3-231ENST00000584063 M0R082 166 aa11□□□□□ -0.65
CDK5RAP3-231ENST00000584063 PCDH7O60245 1069 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms