RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ABCG2Q9UNQ0 655 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 AFF2P51816 1311 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 KIF7Q2M1P5 1343 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 YJEFN3A6XGL0 299 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 A8MX80 341 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 PSMA7O14818 248 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 STX6O43752 255 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 GMNNO75496 209 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 LYPD3O95274 346 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 GJB5O95377 273 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 TXNDC12O95881 172 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 FCER2P06734 321 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 SNRPCP09234 159 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 CD1EP15812 388 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 IDSP22304 550 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 YWHAHQ04917 246 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 SCARB2Q14108 478 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 STX1AQ16623 288 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 QRICH1Q2TAL8 776 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 ZNF789Q5FWF6 425 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 HERC4Q5GLZ8 1057 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 TCHHL1Q5QJ38 904 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 KCTD11Q693B1 232 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 RHBDD2Q6NTF9 364 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 TATDN1Q6P1N9 297 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 CD164L2Q6UWJ8 174 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 ADAMTSL5Q6ZMM2 481 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 LINC00518Q8N0U6 118 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 Q8N9G6 341 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 U2AF1L4Q8WU68 220 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 GLYATL1Q969I3 302 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 FAF2Q96CS3 445 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 MRPL53Q96EL3 112 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 MAGEB18Q96M61 343 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 OR5M11Q96RB7 305 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 SPAG8Q99932 426 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 DDX50Q9BQ39 737 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 FUNDC2Q9BWH2 189 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 CACNG6Q9BXT2 260 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 DDX28Q9NUL7 540 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 DNAJC11Q9NVH1 559 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 ADAM22Q9P0K1 906 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 CIDEBQ9UHD4 219 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 DIMT1Q9UNQ2 313 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 ATG4BQ9Y4P1 393 aa2.22□□□□□ -2.05
SMCHD1-206ENST00000581631 OAS1P00973 400 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 HOXC4P09017 264 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 PVRP15151 417 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 IL2RGP31785 369 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 STIP1P31948 543 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 SERPINH1P50454 418 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 ARHGDIBP52566 201 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 SLC12A3P55017 1021 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 GEMP55040 296 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 STX17P56962 302 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 RPS4XP62701 263 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 ASIC1P78348 528 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 KLF5Q13887 457 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 STXBP2Q15833 593 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 TYSND1Q2T9J0 566 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 MPPE1Q53F39 396 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 MS4A13Q5J8X5 152 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 TAF3Q5VWG9 929 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 PRAMEF8Q5VWM4 474 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 RTL6Q6ICC9 239 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 GPR142Q7Z601 462 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 LUZP1Q86V48 1076 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 UNC5CLQ8IV45 518 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 LINC01006Q8NI28 216 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 JPH2Q9BR39 696 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 ADPGKQ9BRR6 497 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 ABCB8Q9NUT2 735 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 KLRF1Q9NZS2 232 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 CNIH4Q9P003 139 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 LEF1Q9UJU2 399 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 EMCNQ9ULC0 261 aa2.21□□□□□ -2.06
SMCHD1-206ENST00000581631 A0A0A6YYD4 124 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 EPOPA6NHQ4 379 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 ZFP92A6NM28 416 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 SH2D1BO14796 132 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 WNT2P09544 360 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 CYP3A5P20815 502 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 SNU13P55769 128 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 MSLNQ13421 630 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 ASAH1Q13510 395 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 CDC42EP5Q6NZY7 148 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 LINC00696Q6ZRV3 163 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 KCTD9Q7L273 389 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 ZNF677Q86XU0 584 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 APOBEC3FQ8IUX4 373 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 STHQ8IWL8 128 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 GPR137CQ8N3F9 429 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 C19orf43Q9BQ61 176 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 FAM173AQ9BQD7 235 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 GPR174Q9BXC1 333 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 TRIM9Q9C026 710 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 DCTPP1Q9H773 170 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 DCLRE1BQ9H816 532 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 ZWILCHQ9H900 591 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms