RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-213	ENST00000581523	PRSS56	P0CW18	603 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	PVR	P15151	417 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	ZNF182	P17025	639 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	TMEM11	P17152	192 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	NELFE	P18615	380 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	XRCC1	P18887	633 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	POLR2C	P19387	275 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	HLA-DPA1	P20036	260 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	MSH3	P20585	1137 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	IDS	P22304	550 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	PSMB4	P28070	264 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	CDKN2B	P42772	138 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	ATP5O	P48047	213 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	LMAN1	P49257	510 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	ZNF75D	P51815	510 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	KPNA2	P52292	529 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	WASHC5	Q12768	1159 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	KLRB1	Q12918	225 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	ABR	Q12979	859 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	GPS2	Q13227	327 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	SLC1A5	Q15758	541 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	ADIPOQ	Q15848	244 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	HSPB2	Q16082	182 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	KYNU	Q16719	465 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	C6orf141	Q5SZD1	244 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	LCN10	Q6JVE6	187 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	LRRC8E	Q6NSJ5	796 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	PWWP2B	Q6NUJ5	590 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	TMEM220	Q6QAJ8	160 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	KDELC1	Q6UW63	502 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	AMZ2	Q86W34	360 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	OOSP2	Q86WS3	158 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	LURAP1L	Q8IV03	231 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	ZNF567	Q8N184	647 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	TC2N	Q8N9U0	490 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	FAM98A	Q8NCA5	519 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	GJC3	Q8NFK1	279 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	OR13C4	Q8NGS5	318 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	KRT35	Q92764	455 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	P3H4	Q92791	437 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	MIB2	Q96AX9	1013 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	SAT2	Q96F10	170 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	ZNF514	Q96K75	400 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	QKI	Q96PU8	341 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	VPS35	Q96QK1	796 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	CHP1	Q99653	195 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	WDR83	Q9BRX9	315 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	ZPBP	Q9BS86	351 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	TUBB6	Q9BUF5	446 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	C1QTNF5	Q9BXJ0	243 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	SLC7A5P2	Q9GIP4	190 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	XKR8	Q9H6D3	395 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	MVB12B	Q9H7P6	319 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	MAGEE1	Q9HCI5	957 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	IL26	Q9NPH9	171 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	AMACR	Q9UHK6	382 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	FAM153A	Q9UHL3	310 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	CRLS1	Q9UJA2	301 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	ANAPC2	Q9UJX6	822 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	AHCTF1	Q8WYP5	2266 aa		4.11	□□□□□ -1.75
MSI2-213	ENST00000581523	NUP210L	Q5VU65	1888 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	hCG_1818297	A0A087WSY0	165 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	OR2A25	A4D2G3	310 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	RGSL1	A5PLK6	1076 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	GLOD5	A6NK44	160 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	LINC01548	A6NM66	108 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523		A8MV72	311 aa	Predicted RBP	4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	CTDSP2	O14595	271 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	STX7	O15400	261 aa	Known RBP	4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	PSTPIP1	O43586	416 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	VEGFD	O43915	354 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	HS6ST1	O60243	411 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	FZD7	O75084	574 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	NKX2-2	O95096	273 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	AGT	P01019	485 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	IGLV2-14	P01704	120 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	APOA4	P06727	396 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	TUBB	P07437	444 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	MYZAP	P0CAP1	466 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	FGF5	P12034	268 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	ETFA	P13804	333 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	ENO3	P13929	434 aa	Predicted RBP	4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	CDH3	P22223	829 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	CTNNA2	P26232	953 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	OTX2	P32243	289 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	TNFSF8	P32971	234 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	HMGCL	P35914	325 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	SLC15A1	P46059	708 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	CAMP	P49913	170 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	CCL11	P51671	97 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	CSE1L	P55060	971 aa	Known RBP	4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	MFAP4	P55083	255 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	ITGA9	Q13797	1035 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	KRT33B	Q14525	404 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	IL11RA	Q14626	422 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	PCGF3	Q3KNV8	242 aa		4.1	□□□□□ -1.75
MSI2-213	ENST00000581523	TEX44	Q53QW1	395 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms