RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 RFTN2Q52LD8 501 aaPredicted RBP17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 TRMT12Q53H54 448 aaKnown RBP17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 FHL5Q5TD97 284 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 C6orf163Q5TEZ5 329 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 TICAM1Q8IUC6 712 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 GPALPP1Q8IXQ4 340 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 VWA5B2Q8N398 1253 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 FAM26EQ8N5C1 309 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 ZNF441Q8N8Z8 693 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 ANKRD42Q8N9B4 389 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 PSD4Q8NDX1 1056 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 PPP1R14CQ8TAE6 165 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 FAM76AQ8TAV0 307 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 C20orf27Q9GZN8 174 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 ANKRA2Q9H9E1 313 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 MYNNQ9NPC7 610 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 TIMMDC1Q9NPL8 285 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 ZNF639Q9UID6 485 aa17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 KLF13Q9Y2Y9 288 aaPredicted RBP17.25■□□□□ 0.35
PPP4R1-215ENST00000580182 SVILO95425 2214 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 RP1L1Q8IWN7 2480 aaPredicted RBP17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 A0A0G2JMM0 328 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 C2orf92A0A1B0GVN3 265 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 A0A1W2PPB8 328 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 A0A1W2PRS3 328 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 PINLYPA6NC86 204 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 KIR3DP1A8MWS1 328 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 LSM1O15116 133 aaKnown RBP17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 BIRC5O15392 142 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 SKAP2O75563 359 aaPredicted RBP17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 ZWINTO95229 277 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 PCSK2P16519 638 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 GSTM5P46439 218 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 NR0B1P51843 470 aaKnown RBP17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 RPL38P63173 70 aaKnown RBP17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 ALDH6A1Q02252 535 aaKnown RBP17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 CASP8Q14790 479 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 GALNTL6Q49A17 601 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 OPN5Q6U736 354 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 TMEM64Q6YI46 380 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 FAM98AQ8NCA5 519 aaKnown RBP17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 OR9A2Q8NGT5 310 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 C16orf52Q8NHV5 167 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 SLC22A8Q8TCC7 542 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 GFM2Q969S9 779 aaKnown RBP17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 CTHRC1Q96CG8 243 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 C3orf30Q96M34 536 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 TMBIM4Q9HC24 238 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 SLC35C2Q9NQQ7 365 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 BCAP29Q9UHQ4 241 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 OSGIN2Q9Y236 505 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 CROCCQ5TZA2 2017 aa17.24■□□□□ 0.35
PPP4R1-215ENST00000580182 NPIPA5E9PKD4 350 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 NME6O75414 186 aaPredicted RBP17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 UNC5CO95185 931 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 HSPA4LO95757 839 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 CBX7O95931 251 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 SERPINE1P05121 402 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 CCL3P10147 92 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 NEFHP12036 1026 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 BGNP21810 368 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 ABCE1P61221 599 aaKnown RBP17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 CEBPEQ15744 281 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 ZNF791Q3KP31 576 aaPredicted RBP17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 ZNF628Q5EBL2 1059 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 XKR7Q5GH72 579 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 GFRALQ6UXV0 394 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 RTL4Q6ZR62 310 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 SIAH3Q8IW03 269 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 OR7G1Q8NGA0 311 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 OR52R1Q8NGF1 315 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 CLHC1Q8NHS4 586 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 KAT2AQ92830 837 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 ADIPOR1Q96A54 375 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 METTL2AQ96IZ6 378 aaKnown RBP17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 FCRL1Q96LA6 429 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 PAIP2Q9BPZ3 127 aaKnown RBP17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 EHD3Q9NZN3 535 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 SEC14L3Q9UDX4 400 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 BAIAP2L1Q9UHR4 511 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 NPIPA1Q9UND3 350 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 ENTPD4Q9Y227 616 aa17.23■□□□□ 0.35
PPP4R1-215ENST00000580182 ATP6AP2A0A1C7CYW4 349 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 KLRC4-KLRK1H3BQV0 150 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 ZNHIT1O43257 154 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 ATP6AP2O75787 350 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 JUNP05412 331 aaKnown RBP17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 RNF224P0DH78 156 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 SDC1P18827 310 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 GPX3P22352 226 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 WDR4P57081 412 aaKnown RBP17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 MAGOHP61326 146 aaKnown RBP17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 HLA-DQA1Q5Y7H0 255 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 ANKRD26P1Q6NSI1 321 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 SLC15A4Q8N697 577 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 ZNF781Q8N8C0 355 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 TLCD1Q96CP7 247 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 TSSK3Q96PN8 268 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 ITPAQ9BY32 194 aa17.22■□□□□ 0.35
PPP4R1-215ENST00000580182 MIEF1Q9NQG6 463 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms