RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 A0A087X1B8 175 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 A0A1W2PR48 441 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 FOXE1O00358 373 aaPredicted RBP16.39■□□□□ 0.21
MKS1-209ENST00000580127 GUCY1B2O75343 617 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 ACTL6AO96019 429 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 NAGAP17050 411 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 TACR1P25103 407 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 ALDH18A1P54886 795 aaKnown RBP16.39■□□□□ 0.21
MKS1-209ENST00000580127 ADAM8P78325 824 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 SORDQ00796 357 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 CAV1Q03135 178 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 CPSF6Q16630 551 aaKnown RBP eCLIP16.39■□□□□ 0.21
MKS1-209ENST00000580127 NHSL2Q5HYW2 709 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 METTL2BQ6P1Q9 378 aaKnown RBP16.39■□□□□ 0.21
MKS1-209ENST00000580127 KLC3Q6P597 504 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 PAMR1Q6UXH9 720 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 C17orf47Q8NEP4 570 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 DOK4Q8TEW6 326 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 ATP6V1E2Q96A05 226 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 GNRHR2Q96P88 292 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 TRIB1Q96RU8 372 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 ATOH8Q96SQ7 321 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 SERPINI1Q99574 410 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 CXorf21Q9HAI6 301 aa16.39■□□□□ 0.21
MKS1-209ENST00000580127 EEF1E1-BLOC1S5C9J1V9 151 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 CASKO14936 926 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 EEF1E1O43324 174 aaKnown RBP16.38■□□□□ 0.21
MKS1-209ENST00000580127 ERN1O75460 977 aaKnown RBP16.38■□□□□ 0.21
MKS1-209ENST00000580127 LRATO95237 230 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 CYP4B1P13584 511 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 STX2P32856 288 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 BSGP35613 385 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 ARL1P40616 181 aaPredicted RBP16.38■□□□□ 0.21
MKS1-209ENST00000580127 CASP3P42574 277 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 FBXW4P57775 412 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 NAB1Q13506 487 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 PFKFB4Q16877 469 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 DEFB113Q30KQ7 82 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 C10orf62Q5T681 223 aaPredicted RBP16.38■□□□□ 0.21
MKS1-209ENST00000580127 MRM1Q6IN84 353 aaKnown RBP16.38■□□□□ 0.21
MKS1-209ENST00000580127 PAGE2Q7Z2X7 111 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 BIVMQ86UB2 503 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 OR1J4Q8NGS1 313 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 ZPLD1Q8TCW7 415 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 TMEM41AQ96HV5 264 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 ZFP3Q96NJ6 502 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 TM9SF2Q99805 663 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 OR10A5Q9H207 317 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 DPH5Q9H2P9 285 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 ACBD3Q9H3P7 528 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 METTL7AQ9H8H3 244 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 IPPKQ9H8X2 491 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 TEX10Q9NXF1 929 aaPredicted RBP16.38■□□□□ 0.21
MKS1-209ENST00000580127 PSME2Q9UL46 239 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 C15orf41Q9Y2V0 281 aa16.38■□□□□ 0.21
MKS1-209ENST00000580127 A0A0A6YYD5 115 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 EEDO75530 441 aaKnown RBP16.37■□□□□ 0.21
MKS1-209ENST00000580127 HOXB4P17483 251 aaPredicted RBP16.37■□□□□ 0.21
MKS1-209ENST00000580127 BMP7P18075 431 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 SSTR4P31391 388 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 DEKP35659 375 aaKnown RBP16.37■□□□□ 0.21
MKS1-209ENST00000580127 XKP51811 444 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 ZNF136P52737 540 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 FUT7Q11130 342 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 ACAP2Q15057 778 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 KBTBD12Q3ZCT8 623 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 TIGD3Q6B0B8 471 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 SLC30A6Q6NXT4 461 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 ENPP6Q6UWR7 440 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 TMEM64Q6YI46 380 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 NUP54Q7Z3B4 507 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 ZNF441Q8N8Z8 693 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 NAXEQ8NCW5 288 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 ISL2Q96A47 359 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 NXNL1Q96CM4 212 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 UBQLN3Q9H347 655 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 FETUBQ9UGM5 382 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 NDRG3Q9UGV2 375 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 SLC6A5Q9Y345 797 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 UTP11Q9Y3A2 253 aaKnown RBP16.37■□□□□ 0.21
MKS1-209ENST00000580127 ABCA2Q9BZC7 2435 aa16.37■□□□□ 0.21
MKS1-209ENST00000580127 MBD3L4A6NDZ8 208 aaPredicted RBP16.36■□□□□ 0.21
MKS1-209ENST00000580127 MBD3L3A6NE82 208 aaPredicted RBP16.36■□□□□ 0.21
MKS1-209ENST00000580127 GOLGA6L10A6NI86 522 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 MBD3L5A6NJ08 208 aaPredicted RBP16.36■□□□□ 0.21
MKS1-209ENST00000580127 ARHGEF9O43307 516 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 TMPRSS11DO60235 418 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 PRKRAO75569 313 aaKnown RBP16.36■□□□□ 0.21
MKS1-209ENST00000580127 SEMA3DO95025 777 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 CLDN9O95484 217 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 AIFM1O95831 613 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 PORP16435 677 aaPredicted RBP16.36■□□□□ 0.21
MKS1-209ENST00000580127 SNTA1Q13424 505 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 GTF2H2Q13888 395 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 PCBP2Q15366 365 aaKnown RBP eCLIP16.36■□□□□ 0.21
MKS1-209ENST00000580127 TTC19Q6DKK2 380 aaPredicted RBP16.36■□□□□ 0.21
MKS1-209ENST00000580127 GTF2H2CQ6P1K8 395 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 CMC1Q7Z7K0 106 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 RNF175Q8N4F7 328 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 L3MBTL4Q8NA19 623 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms