RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 RRAGDQ9NQL2 400 aaPredicted RBP13.7□□□□□ -0.22
SS18-212ENST00000579061 MAT2BQ9NZL9 334 aa13.7□□□□□ -0.22
SS18-212ENST00000579061 EHD3Q9NZN3 535 aa13.7□□□□□ -0.22
SS18-212ENST00000579061 CNIH4Q9P003 139 aa13.7□□□□□ -0.22
SS18-212ENST00000579061 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.7□□□□□ -0.22
SS18-212ENST00000579061 ZNF639Q9UID6 485 aa13.7□□□□□ -0.22
SS18-212ENST00000579061 RAB21Q9UL25 225 aa13.7□□□□□ -0.22
SS18-212ENST00000579061 V9GYY5 206 aaPredicted RBP13.7□□□□□ -0.22
SS18-212ENST00000579061 CCL21O00585 134 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 HS6ST1O60243 411 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 GLSO94925 669 aaPredicted RBP13.69□□□□□ -0.22
SS18-212ENST00000579061 CLDN1O95832 211 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 ANXA4P09525 319 aaPredicted RBP13.69□□□□□ -0.22
SS18-212ENST00000579061 CCL3P10147 92 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 ABOP16442 354 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 PRPH2P23942 346 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 FEN1P39748 380 aaKnown RBP13.69□□□□□ -0.22
SS18-212ENST00000579061 BTKQ06187 659 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 ZNF763Q0D2J5 394 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 C3AR1Q16581 482 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 NTRK2Q16620 822 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 IMPG1Q17R60 797 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 HYAL4Q2M3T9 481 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 CMPK2Q5EBM0 449 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 SPDYAQ5MJ70 313 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 PAOXQ6QHF9 649 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 SCIMPQ6UWF3 145 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 FAM47EQ6ZV65 393 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 SLC22A16Q86VW1 577 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 CHERPQ8IWX8 916 aaKnown RBP13.69□□□□□ -0.22
SS18-212ENST00000579061 SRRM1Q8IYB3 904 aaKnown RBP13.69□□□□□ -0.22
SS18-212ENST00000579061 LRRC25Q8N386 305 aaPredicted RBP13.69□□□□□ -0.22
SS18-212ENST00000579061 FBXW8Q8N3Y1 598 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 ZNF675Q8TD23 568 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 ADIPOR1Q96A54 375 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 ERP27Q96DN0 273 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 CNRIP1Q96F85 164 aaPredicted RBP13.69□□□□□ -0.22
SS18-212ENST00000579061 FAM111AQ96PZ2 611 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 SMC6Q96SB8 1091 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 ZDHHC11Q9H8X9 412 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 IL1RL2Q9HB29 575 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 SENP1Q9P0U3 644 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 UTS2RQ9UKP6 389 aa13.69□□□□□ -0.22
SS18-212ENST00000579061 PINLYPA6NC86 204 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 SLC28A1O00337 649 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 NPHS1O60500 1241 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 ZG16O60844 167 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 PTGER1P34995 402 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 RFC3P40938 356 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 TMED10P49755 219 aaKnown RBP13.68□□□□□ -0.22
SS18-212ENST00000579061 NR0B1P51843 470 aaKnown RBP13.68□□□□□ -0.22
SS18-212ENST00000579061 NRG3P56975 720 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 PPIAP62937 165 aaKnown RBP13.68□□□□□ -0.22
SS18-212ENST00000579061 PLGLB1Q02325 96 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 FOXO1Q12778 655 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 CEBPEQ15744 281 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 FAM111BQ6SJ93 734 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 EID3Q8N140 333 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.68□□□□□ -0.22
SS18-212ENST00000579061 TCP10LQ8TDR4 215 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 SECISBP2Q96T21 854 aaKnown RBP13.68□□□□□ -0.22
SS18-212ENST00000579061 TTTY12Q9BZ98 90 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 BRINP2Q9C0B6 783 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 TNFRSF12AQ9NP84 129 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 GIMAP4Q9NUV9 329 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 NPFFR2Q9Y5X5 522 aa13.68□□□□□ -0.22
SS18-212ENST00000579061 NAV2Q8IVL1 2488 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 A0A0G2JMM0 328 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 A0A1W2PPB8 328 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 A0A1W2PRS3 328 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 A1L4Q6 167 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 ANKRD33BA6NCL7 494 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 KIR3DP1A8MWS1 328 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 PRRG2O14669 202 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 TP53I11O14683 189 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 AZIN1O14977 448 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 BCAS2O75934 225 aaPredicted RBP13.67□□□□□ -0.22
SS18-212ENST00000579061 FGF4P08620 206 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 NEFHP12036 1026 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 NAGAP17050 411 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 DDCP20711 480 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 GPX3P22352 226 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 ALDH3A1P30838 453 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 SOX18P35713 384 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 DCAF7P61962 342 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 HSF1Q00613 529 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 DUSP2Q05923 314 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 TBCELQ5QJ74 424 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 FAM71E1Q6IPT2 247 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 ARHGAP11AQ6P4F7 1023 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 RPTNQ6XPR3 784 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 ZNF808Q8N4W9 903 aaPredicted RBP13.67□□□□□ -0.22
SS18-212ENST00000579061 FAM13CQ8NE31 585 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 OR52N2Q8NGI0 321 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 HSPBAP1Q96EW2 488 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 CCDC120Q96HB5 630 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 MYNNQ9NPC7 610 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 SLC35C2Q9NQQ7 365 aa13.67□□□□□ -0.22
SS18-212ENST00000579061 TUBA8Q9NY65 449 aaPredicted RBP13.67□□□□□ -0.22
SS18-212ENST00000579061 TAS2R7Q9NYW3 318 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms