RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 BAG5Q9UL15 447 aa19.09■□□□□ 0.65
SMG8-203ENST00000578922 UGT2B11O75310 529 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 ALOX12P18054 663 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 PPIBP23284 216 aaKnown RBP19.08■□□□□ 0.65
SMG8-203ENST00000578922 NCBP2P52298 156 aaKnown RBP eCLIP19.08■□□□□ 0.65
SMG8-203ENST00000578922 RPS26P62854 115 aaKnown RBP19.08■□□□□ 0.65
SMG8-203ENST00000578922 RELAQ04206 551 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 SPDYE7PQ495Y7 208 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 CPZQ66K79 652 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 SZRD1Q7Z422 152 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 MCATQ8IVS2 390 aaKnown RBP19.08■□□□□ 0.65
SMG8-203ENST00000578922 HS3ST5Q8IZT8 346 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 ZNF655Q8N720 491 aaPredicted RBP19.08■□□□□ 0.65
SMG8-203ENST00000578922 CHPT1Q8WUD6 406 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 ZBED6CLQ96FA7 236 aaPredicted RBP19.08■□□□□ 0.65
SMG8-203ENST00000578922 FUNDC2Q9BWH2 189 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 CHST8Q9H2A9 424 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 GLIPR2Q9H4G4 154 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 ENPP5Q9UJA9 477 aa19.08■□□□□ 0.65
SMG8-203ENST00000578922 ARID1BQ8NFD5 2236 aaPredicted RBP19.08■□□□□ 0.64
SMG8-203ENST00000578922 IGHV5-51A0A0C4DH38 117 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 B3GALT2O43825 422 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 DDX5P17844 614 aaKnown RBP19.08■□□□□ 0.64
SMG8-203ENST00000578922 AQP1P29972 269 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 DUSP2Q05923 314 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 LAIR2Q6ISS4 152 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 DCDC5Q6ZRR9 648 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 DTWD2Q8NBA8 298 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 OR5T3Q8NGG3 340 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 KLHL6Q8WZ60 621 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 CNRIP1Q96F85 164 aaPredicted RBP19.08■□□□□ 0.64
SMG8-203ENST00000578922 SERINC2Q96SA4 455 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 CSF3RQ99062 836 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 NLNQ9BYT8 704 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 C1GALT1Q9NS00 363 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 SOHLH2Q9NX45 425 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 LYARQ9NX58 379 aaKnown RBP19.08■□□□□ 0.64
SMG8-203ENST00000578922 WARS2Q9UGM6 360 aaKnown RBP19.08■□□□□ 0.64
SMG8-203ENST00000578922 CORO2BQ9UQ03 480 aa19.08■□□□□ 0.64
SMG8-203ENST00000578922 SPTBP11277 2137 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 BCKDKO14874 412 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 ZSCAN9O15535 394 aaPredicted RBP19.07■□□□□ 0.64
SMG8-203ENST00000578922 NR2F6P10588 404 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 UQCRC2P22695 453 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 CPN2P22792 545 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 GPC1P35052 558 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 LIM2P55344 173 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 LPAL2Q16609 132 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 SLC48A1Q6P1K1 146 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 USP53Q70EK8 1073 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 TMEM179BQ7Z7N9 219 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 CCDC116Q8IYX3 515 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 OR2I1PQ8NGU4 316 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 AMDHD1Q96NU7 426 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 TAS2R7Q9NYW3 318 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 EHD3Q9NZN3 535 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 SUSD2Q9UGT4 822 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 CSNK1G3Q9Y6M4 447 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 SCN2AQ99250 2005 aa19.07■□□□□ 0.64
SMG8-203ENST00000578922 PATE3B3GLJ2 98 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 ATXN8OSP0DMR3 200 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 PCMT1P22061 227 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 NTSP30990 170 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 FRKP42685 505 aaPredicted RBP19.06■□□□□ 0.64
SMG8-203ENST00000578922 ARHGDIAP52565 204 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 CXCR4P61073 352 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 HLA-BQ31612 363 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 SNAP47Q5SQN1 464 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 PIK3C3Q8NEB9 887 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 OR52N2Q8NGI0 321 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 ROGDIQ9GZN7 287 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 SIRT3Q9NTG7 399 aaPredicted RBP19.06■□□□□ 0.64
SMG8-203ENST00000578922 CES1P1Q9UKY3 287 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 ZNF682O95780 498 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 IMPDH2P12268 514 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 EPHA8P29322 1005 aaPredicted RBP19.06■□□□□ 0.64
SMG8-203ENST00000578922 RXRGP48443 463 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 SIM1P81133 766 aaPredicted RBP19.06■□□□□ 0.64
SMG8-203ENST00000578922 CDK5R2Q13319 367 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 C11orf74Q86VG3 221 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 ZDHHC21Q8IVQ6 265 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 SLC15A4Q8N697 577 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 NATD1Q8N6N6 113 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 SGCDQ92629 289 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 KCMF1Q9P0J7 381 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 ENTPD4Q9Y227 616 aa19.06■□□□□ 0.64
SMG8-203ENST00000578922 TNRC6BQ9UPQ9 1833 aaKnown RBP19.06■□□□□ 0.64
SMG8-203ENST00000578922 IGHV1OR21-1A0A087WYE8 117 aa19.05■□□□□ 0.64
SMG8-203ENST00000578922 ZNF99A8MXY4 864 aaPredicted RBP19.05■□□□□ 0.64
SMG8-203ENST00000578922 SGK494L7N484 410 aa19.05■□□□□ 0.64
SMG8-203ENST00000578922 NUDT21O43809 227 aaKnown RBP19.05■□□□□ 0.64
SMG8-203ENST00000578922 MRPS14O60783 128 aaKnown RBP19.05■□□□□ 0.64
SMG8-203ENST00000578922 B4GALT2O60909 372 aa19.05■□□□□ 0.64
SMG8-203ENST00000578922 BCAS1O75363 584 aaPredicted RBP19.05■□□□□ 0.64
SMG8-203ENST00000578922 AGXTP21549 392 aa19.05■□□□□ 0.64
SMG8-203ENST00000578922 IGFBP5P24593 272 aa19.05■□□□□ 0.64
SMG8-203ENST00000578922 MLLT3P42568 568 aaPredicted RBP19.05■□□□□ 0.64
SMG8-203ENST00000578922 TP53BP2Q13625 1128 aa19.05■□□□□ 0.64
SMG8-203ENST00000578922 KEAP1Q14145 624 aa19.05■□□□□ 0.64
SMG8-203ENST00000578922 SIM2Q14190 667 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms