RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 NPFFR2Q9Y5X5 522 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 PRR14LQ5THK1 2151 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 TLN2Q9Y4G6 2542 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 CTAG2O75638 210 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 KRT38O76015 456 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 CLDN9O95484 217 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 PIK3R1P27986 724 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 FEN1P39748 380 aaKnown RBP8.18□□□□□ -1.1
GGA3-207ENST00000578896 KIR2DL3P43628 341 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 CCNG1P51959 295 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 CDH13P55290 713 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 PHEXP78562 749 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 CAV1Q03135 178 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 CRYZQ08257 329 aaKnown RBP8.18□□□□□ -1.1
GGA3-207ENST00000578896 TRAF3Q13114 568 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 NAB1Q13506 487 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 CUL3Q13618 768 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 EXOSC7Q15024 291 aaKnown RBP8.18□□□□□ -1.1
GGA3-207ENST00000578896 ACSF3Q4G176 576 aaPredicted RBP8.18□□□□□ -1.1
GGA3-207ENST00000578896 WIPI1Q5MNZ9 446 aaPredicted RBP8.18□□□□□ -1.1
GGA3-207ENST00000578896 DCST1Q5T197 706 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 HLA-DQA1Q5Y7H0 255 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 TTC19Q6DKK2 380 aaPredicted RBP8.18□□□□□ -1.1
GGA3-207ENST00000578896 POMZP3Q6PJE2 187 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 YRDCQ86U90 279 aaKnown RBP8.18□□□□□ -1.1
GGA3-207ENST00000578896 NUDT13Q86X67 352 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 GALNT12Q8IXK2 581 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 TAGAPQ8N103 731 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 ZNF615Q8N8J6 731 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 L3MBTL4Q8NA19 623 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 ADCY4Q8NFM4 1077 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 OR4K14Q8NGD5 310 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 SPPL2AQ8TCT8 520 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 ADIPOR1Q96A54 375 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 REPS1Q96D71 796 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 ZNF597Q96LX8 424 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 HBEGFQ99075 208 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 TIMP4Q99727 224 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 PELOQ9BRX2 385 aaKnown RBP8.18□□□□□ -1.1
GGA3-207ENST00000578896 POLDIP3Q9BY77 421 aaKnown RBP8.18□□□□□ -1.1
GGA3-207ENST00000578896 RAB17Q9H0T7 212 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 NXF5Q9H1B4 397 aaKnown RBP8.18□□□□□ -1.1
GGA3-207ENST00000578896 OR10A5Q9H207 317 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 ACKR4Q9NPB9 350 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 ZDHHC18Q9NUE0 388 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.18□□□□□ -1.1
GGA3-207ENST00000578896 CAMK2AQ9UQM7 478 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 PLEKHA6Q9Y2H5 1048 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 ABCA2Q9BZC7 2435 aa8.18□□□□□ -1.1
GGA3-207ENST00000578896 OR6C76A6NM76 312 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 FOXE1O00358 373 aaPredicted RBP8.17□□□□□ -1.1
GGA3-207ENST00000578896 TP53I11O14683 189 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 ERAL1O75616 437 aaKnown RBP8.17□□□□□ -1.1
GGA3-207ENST00000578896 EPPINO95925 133 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 CPMP14384 443 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 GABRA1P14867 456 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 BMP7P18075 431 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 S1PR1P21453 382 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 GPX3P22352 226 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 TCEA1P23193 301 aaKnown RBP8.17□□□□□ -1.1
GGA3-207ENST00000578896 SOX18P35713 384 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 CASP3P42574 277 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 MASP1P48740 699 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 SERPINB8P50452 374 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 CDK9P50750 372 aaKnown RBP8.17□□□□□ -1.1
GGA3-207ENST00000578896 ZNF136P52737 540 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 MGAT2Q10469 447 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 FUT7Q11130 342 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 BIKQ13323 160 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 RPS6KA2Q15349 733 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 LTB4RQ15722 352 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 CEBPEQ15744 281 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 SLC25A35Q3KQZ1 300 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 TCHHL1Q5QJ38 904 aaPredicted RBP8.17□□□□□ -1.1
GGA3-207ENST00000578896 CCNYL2Q5T2Q4 361 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 FRG2Q64ET8 278 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 OR52E8Q6IFG1 317 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 KLC3Q6P597 504 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 MILR1Q7Z6M3 343 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 OR4F6Q8NGB9 312 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 LINC01560Q8TB33 94 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 RDH11Q8TC12 318 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 FRG2BQ96QU4 278 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 TRIB1Q96RU8 372 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 NODALQ96S42 347 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 SERPINI1Q99574 410 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 SH3GL2Q99962 352 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 ITPAQ9BY32 194 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 UGT2B28Q9BY64 529 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 BRINP2Q9C0B6 783 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 ANKRA2Q9H9E1 313 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 GALNT9Q9HCQ5 603 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 XPR1Q9UBH6 696 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 B4GALT7Q9UBV7 327 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 BCAP29Q9UHQ4 241 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 PCTPQ9UKL6 214 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 SLC12A4Q9UP95 1085 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 TSC22D4Q9Y3Q8 395 aa8.17□□□□□ -1.1
GGA3-207ENST00000578896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.17□□□□□ -1.1
GGA3-207ENST00000578896 CSPG4Q6UVK1 2322 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms