RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 OR51G2Q8NGK0 314 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 OR9G4Q8NGQ1 327 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SPATA22Q8NHS9 363 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SAP25Q8TEE9 199 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SSMEM1Q8WWF3 244 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SMPDL3AQ92484 453 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 CD101Q93033 1021 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 FUBP1Q96AE4 644 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 LENG1Q96BZ8 264 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 ZBTB9Q96C00 473 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 METTL2AQ96IZ6 378 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 AKR1E2Q96JD6 320 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 CEP19Q96LK0 163 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 C3orf30Q96M34 536 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 AMDHD1Q96NU7 426 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 ZNF347Q96SE7 839 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 COPS8Q99627 209 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 CPPED1Q9BRF8 314 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 C7orf50Q9BRJ6 194 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 PARD6BQ9BYG5 372 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 PRRG4Q9BZD6 226 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 MIS12Q9H081 205 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 LPAR2Q9HBW0 351 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 RNF181Q9P0P0 153 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 KLHL13Q9P2N7 655 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 LHX3Q9UBR4 397 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SLC7A8Q9UHI5 535 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 TSC22D4Q9Y3Q8 395 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 PCDHAC2Q9Y5I4 1007 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SIRT4Q9Y6E7 314 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 WNT6Q9Y6F9 365 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 LRPPRCP42704 1394 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 FHAD1B1AJZ9 1412 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 FHOD3Q2V2M9 1422 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 LRRC3CA6NJW4 275 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SMIM23A6NLE4 172 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 BTBD19C9JJ37 291 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 TMEM189-UBE2V1I3L0A0 370 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 LIN7AO14910 233 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 RNMTO43148 476 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SLC28A2O43868 658 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 OR10H3O60404 316 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SERPINE2P07093 398 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 TRIM49P0CI25 452 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 TRIM49CP0CI26 452 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 HSMCR30P0CW71 290 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 TFPIP10646 304 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 ETS2P15036 469 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 COL8A1P27658 744 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CHATP28329 748 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CHRNA5P30532 468 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 HNRNPH3P31942 346 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CDH5P33151 784 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 GLIPR1P48060 266 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CSNK1DP48730 415 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 RRADP55042 308 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 TPTEP56180 551 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 E2F1Q01094 437 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CHRNB3Q05901 458 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 MAD2L1Q13257 205 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 UBE2V1Q13404 147 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 IKZF1Q13422 519 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 FASTKD3Q14CZ7 662 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 ALX1Q15699 326 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 ZNF528Q3MIS6 628 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 GLYR1Q49A26 553 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SYTL3Q4VX76 610 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 KLHL22Q53GT1 634 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 COQ5Q5HYK3 327 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 LAIR1Q6GTX8 287 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SLC8B1Q6J4K2 584 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 RGMBQ6NW40 437 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 HSDL2Q6YN16 418 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 DPY19L4Q7Z388 723 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 GOLGA7Q7Z5G4 137 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 PARGQ86W56 976 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CCDC25Q86WR0 208 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CHSY1Q86X52 802 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 PALB2Q86YC2 1186 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SLC38A6Q8IZM9 456 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 D2HGDHQ8N465 521 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 PAQR4Q8N4S7 273 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 EMC1Q8N766 993 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 MAB21L3Q8N8X9 362 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CNBD1Q8NA66 436 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CYB561A3Q8NBI2 242 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CHDHQ8NE62 594 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 OR2L3Q8NG85 312 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 OR13C3Q8NGS6 347 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SLC35B4Q969S0 331 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 C9orf72Q96LT7 481 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 ZNF512Q96ME7 567 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SLC30A2Q9BRI3 323 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 AIFM2Q9BRQ8 373 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 DPH7Q9BTV6 452 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 FUCA2Q9BTY2 467 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 UPF3AQ9H1J1 476 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 HIPK2Q9H2X6 1198 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 FOXP1Q9H334 677 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms