RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 NENFQ9UMX5 172 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 BTRCQ9Y297 605 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 RPH3AQ9Y2J0 694 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 PCYT1BQ9Y5K3 369 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 GMEB1Q9Y692 573 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 TGP01266 2768 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 A0A1B0GUH1 482 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 WDR91A4D1P6 747 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 SOCS2O14508 198 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 STX10O60499 249 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 E2F6O75461 281 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 CLDN11O75508 207 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 CEACAM4O75871 244 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 POP4O95707 220 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 SYF2O95926 243 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 NR3C1P04150 777 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 CYP1A2P05177 515 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 SELLP14151 372 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 DESP17661 470 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 DDX5P17844 614 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 ACADLP28330 430 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 OTX2P32243 289 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 PIGAP37287 484 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 SLC15A1P46059 708 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 SERPINH1P50454 418 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 CDH4P55283 916 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 TAS2R40P59535 323 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 PPP1CAP62136 330 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 RPS15P62841 145 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 CSNK1G2P78368 415 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 MRPS34P82930 218 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 CKAP4Q07065 602 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 ILF3Q12906 894 aaKnown RBP eCLIP5.02□□□□□ -1.613e-7■■■□□ 16.3
SF3B3-214ENST00000572365 RIPK1Q13546 671 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 CUL3Q13618 768 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 NR1D2Q14995 579 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 PRTGQ2VWP7 1150 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 TMEM52BQ4KMG9 183 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 DCAF10Q5QP82 559 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 BEND6Q5SZJ8 279 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 MFSD4BQ5TF39 518 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 OTUD1Q5VV17 481 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 LYPLAL1Q5VWZ2 237 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 C11orf87Q6NUJ2 197 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 METTL2BQ6P1Q9 378 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 TMEM270Q6UE05 265 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 MEX3BQ6ZN04 569 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 CCDC73Q6ZRK6 1079 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 RFLNAQ6ZTI6 216 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 CCDC121Q6ZUS5 278 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 DPPA4Q7L190 304 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 KRT74Q7RTS7 529 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 SPATA21Q7Z572 469 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 PCDH20Q8N6Y1 951 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 NRACQ8N912 160 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 SLC38A9Q8NBW4 561 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 CATSPER1Q8NEC5 780 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 OR8K1Q8NGG5 319 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 DYDC1Q8WWB3 177 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 IRGQQ8WZA9 623 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 RAB7BQ96AH8 199 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 TBC1D31Q96DN5 1066 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 SAT2Q96F10 170 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 METTL2AQ96IZ6 378 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 AGAP3Q96P47 875 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 SRSF8Q9BRL6 282 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 ZPBPQ9BS86 351 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 CARD6Q9BX69 1037 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 GSDMCQ9BYG8 508 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 KCNN2Q9H2S1 579 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 VCXQ9H320 206 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 VCX3BQ9H321 246 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 RABEP2Q9H5N1 569 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 MCCC2Q9HCC0 563 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 VCX3AQ9NNX9 186 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 PDE7BQ9NP56 450 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 ACP6Q9NPH0 428 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 AGPAT4Q9NRZ5 378 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 SAMSN1Q9NSI8 373 aaKnown RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 WDR37Q9Y2I8 494 aa5.02□□□□□ -1.61
SF3B3-214ENST00000572365 KLF2Q9Y5W3 355 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-214ENST00000572365 LRRD1A4D1F6 860 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CTAGE15A4D2H0 777 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CFAP73A6NFT4 308 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 DNAJC9-AS1A6NH13 148 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 J3KR12 359 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 VCYO14598 125 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 IKBKBO14920 756 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 TIMM23O14925 209 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 P4HA2O15460 535 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 ZW10O43264 779 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 ITM2AO43736 263 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 KIF5CO60282 957 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 TPPPO94811 219 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 LCA5LO95447 670 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 F10P00742 488 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CYC1P08574 325 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 VIMP08670 466 aaKnown RBP5.01□□□□□ -1.61
SF3B3-214ENST00000572365 STSP08842 583 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CTAGE8P0CG41 777 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms