RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 GPR143P51810 404 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 GPR85P60893 370 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 ACSM2AQ08AH3 577 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 TERF2Q15554 542 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 ACSM2BQ68CK6 577 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 UBE3DQ7Z6J8 389 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 CDH24Q86UP0 819 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 SCUBE1Q8IWY4 988 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 CKAP2Q8WWK9 683 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 MAGEB18Q96M61 343 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 PNO1Q9NRX1 252 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 PLSCR2Q9NRY7 297 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 PNPOQ9NVS9 261 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 PPIEQ9UNP9 301 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 DNAJC15Q9Y5T4 150 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 INTS1Q8N201 2190 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 DNAJC13O75165 2243 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 TGFBR3LH3BV60 316 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 PIP5K1BO14986 540 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 SNNO75324 88 aaPredicted RBP13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 KLK1P06870 262 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 KITP10721 976 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 IGFBP2P18065 325 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 PPP2R1BP30154 601 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 BSGP35613 385 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 SLAMF1Q13291 335 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 RUNX2Q13950 521 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 PDCD2Q16342 344 aaPredicted RBP13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 SPIN4Q56A73 249 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 CCNYL2Q5T2Q4 361 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 TMEM211Q6ICI0 200 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 ARHGAP11AQ6P4F7 1023 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 SPNS3Q6ZMD2 512 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 ZNF793Q6ZN11 406 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 TRIM46Q7Z4K8 759 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 METTL4Q8N3J2 472 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 C1orf52Q8N6N3 182 aaKnown RBP13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 OR52N2Q8NGI0 321 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 NCLNQ969V3 563 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 VMP1Q96GC9 406 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 CCT7Q99832 543 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 TP63Q9H3D4 680 aaPredicted RBP13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 PRTFDC1Q9NRG1 225 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 DEPPQ9NTK1 212 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 KCMF1Q9P0J7 381 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 ADAM29Q9UKF5 820 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 MRPS33Q9Y291 106 aaKnown RBP13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 PTGDR2Q9Y5Y4 395 aa13.72□□□□□ -0.21
NPLOC4-207ENST00000572346 PHF3Q92576 2039 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 PRKNO60260 465 aaPredicted RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 SEC22BO75396 215 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 RSL1D1O76021 490 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 PDE9AO76083 593 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 CPN2P22792 545 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 SSR4P51571 173 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 NR0B1P51843 470 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 HNRNPFP52597 415 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 HSD17B7P56937 341 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 RAB38P57729 211 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 OCRLQ01968 901 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 UGT3A2Q3SY77 523 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 C16orf47Q6ZP98 133 aaPredicted RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 RNF165Q6ZSG1 346 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 COMMD6Q7Z4G1 85 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 ZCCHC7Q8N3Z6 543 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 RPRMLQ8N4K4 120 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 PSD4Q8NDX1 1056 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 TMEM52Q8NDY8 209 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 ASB5Q8WWX0 329 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 APIPQ96GX9 242 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 PPP1R36Q96LQ0 422 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 TUBB1Q9H4B7 451 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 DDX31Q9H8H2 851 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 LIN28AQ9H9Z2 209 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 LRTM1Q9HBL6 345 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 LYRM4Q9HD34 91 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 TIMMDC1Q9NPL8 285 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 LYARQ9NX58 379 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 MARCOQ9UEW3 520 aaPredicted RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 PHF11Q9UIL8 331 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 HAO1Q9UJM8 370 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 DAPP1Q9UN19 280 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 RNF6Q9Y252 685 aa13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 YARS2Q9Y2Z4 477 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-207ENST00000572346 GNG14A0A1W2PPG7 69 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 PINLYPA6NC86 204 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 NKX2-6A6NCS4 301 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 TMEM200CA6NKL6 621 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 SLCO1B7G3V0H7 640 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 CLDN4O14493 209 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 PCDH7O60245 1069 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 GUCY1B2O75343 617 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 EEDO75530 441 aaKnown RBP13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 ZFAND5O76080 213 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 SCELO95171 688 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 GBAP04062 536 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 CHRNB4P30926 498 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 TLX1P31314 330 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 MAPK12P53778 367 aa13.7□□□□□ -0.22
NPLOC4-207ENST00000572346 LIM2P55344 173 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms