RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CYB5D2Q8WUJ1 264 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TREX2Q9BQ50 279 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-207ENST00000572253 MCOLN1Q9GZU1 580 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TRIM45Q9H8W5 580 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-207ENST00000572253 ZSCAN32Q9NX65 697 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 DKK3Q9UBP4 350 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 ACAD8Q9UKU7 415 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 CARD8Q9Y2G2 431 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 SMIM30A4D0T7 59 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 KPNA3O00505 521 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-207ENST00000572253 ORC5O43913 435 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 PQBP1O60828 265 aaKnown RBP10.18□□□□□ -0.78
CCDC40-207ENST00000572253 EPHX1P07099 455 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TYRP14679 529 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 GABRA5P31644 462 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 MMP12P39900 470 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 CHRNEQ04844 493 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 MADCAM1Q13477 382 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 IL18Q14116 193 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 YIF1BQ5BJH7 314 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TIGD3Q6B0B8 471 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 RAET1GQ6H3X3 334 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 QSOX2Q6ZRP7 698 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 PDZD3Q86UT5 571 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 NUDT13Q86X67 352 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TCTE3Q8IZS6 198 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 BBS10Q8TAM1 723 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 GATAD2BQ8WXI9 593 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 IRF7Q92985 503 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 OTULINQ96BN8 352 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 COQ7Q99807 217 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 KATNB1Q9BVA0 655 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 SLC46A2Q9BY10 475 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 FGF20Q9NP95 211 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TAS2R7Q9NYW3 318 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 THSD7BQ9C0I4 1608 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 M0R3H8 397 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TNFRSF10AO00220 468 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 HMGN4O00479 90 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 SEC14L5O43304 696 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 CHST10O43529 356 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 NDUFB5O43674 189 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 CPNE3O75131 537 aaKnown RBP10.18□□□□□ -0.78
CCDC40-207ENST00000572253 FGBP02675 491 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 MSL3P1P0C860 447 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 OR12D1P0DN82 309 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 PRKCAP17252 672 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 LAG3P18627 525 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 MMP11P24347 488 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 SSTR4P31391 388 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 KIR2DL3P43628 341 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 KHKP50053 298 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TMEM44Q2T9K0 475 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 OR2G6Q5TZ20 316 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 SLC27A4Q6P1M0 643 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 CNIH2Q6PI25 160 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 PLCZ1Q86YW0 608 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 C2orf73Q8N5S3 287 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TBC1D19Q8N5T2 526 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 OR52P1PQ8NH57 321 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TMEM163Q8TC26 289 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TM4SF18Q96CE8 201 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 F2RL3Q96RI0 385 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 OR51I1Q9H343 314 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 TRPV5Q9NQA5 729 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 RBFOX1Q9NWB1 397 aaKnown RBP10.18□□□□□ -0.78
CCDC40-207ENST00000572253 PCDHGB7Q9Y5F8 929 aa10.18□□□□□ -0.78
CCDC40-207ENST00000572253 DOCK6Q96HP0 2047 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 RTCAO00442 366 aaKnown RBP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 POP7O75817 140 aaKnown RBP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 KLHL18O94889 574 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 HLA-DPB1P04440 258 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 MTNR1AP48039 350 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 ST8SIA6P61647 398 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 TATDN3Q17R31 274 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 WSCD2Q2TBF2 565 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 ZNF628Q5EBL2 1059 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 RFKQ969G6 155 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 RNF170Q96K19 258 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 CAMK1GQ96NX5 476 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 IL17FQ96PD4 163 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 MVB12BQ9H7P6 319 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 NIPAL2Q9H841 368 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 TESQ9UGI8 421 aaKnown RBP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 FBXW2Q9UKT8 454 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 A4GNTQ9UNA3 340 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 ALPK3Q96L96 1907 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 PLPP1O14494 284 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 APOL3O95236 402 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 PTBP1P26599 531 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 NTSP30990 170 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 ATP6V1E1P36543 226 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 BUD31P41223 144 aaPredicted RBP10.17□□□□□ -0.78
CCDC40-207ENST00000572253 MAN2A2P49641 1150 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 MINDY4Q4G0A6 757 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 PPP2R2DQ66LE6 453 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 ACSM5Q6NUN0 579 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 YIPF7Q8N8F6 280 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 ZFAND1Q8TCF1 268 aa10.17□□□□□ -0.78
CCDC40-207ENST00000572253 SLC9A6Q92581 669 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms