RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 RTL9Q8NET4 1388 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 NPC1L1Q9UHC9 1359 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 SH3TC1Q8TE82 1336 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 CLRN2A0PK11 232 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 EFCAB7A8K855 629 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 EEF2KO00418 725 aaKnown RBP1.27□□□□□ -2.21
SMG1-212ENST00000566328 PGRMC2O15173 223 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 CREB3O43889 395 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 UFL1O94874 794 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 PGM3O95394 542 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 ADORA1P30542 326 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 SLC1A3P43003 542 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 MTCP1P56278 107 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 BACE1P56817 501 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 PRPF4BQ13523 1007 aaKnown RBP1.27□□□□□ -2.21
SMG1-212ENST00000566328 CRY2Q49AN0 593 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 C14orf28Q4W4Y0 310 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 PAN3Q58A45 887 aaKnown RBP1.27□□□□□ -2.21
SMG1-212ENST00000566328 HSP90AB4PQ58FF6 505 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 BEND3Q5T5X7 828 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 ZNF691Q5VV52 312 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 SLC27A4Q6P1M0 643 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 TATDN1Q6P1N9 297 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 MFN1Q8IWA4 741 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 CERS5Q8N5B7 392 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 TC2NQ8N9U0 490 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 ZNF540Q8NDQ6 660 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 OR13F1Q8NGS4 319 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 VSIG2Q96IQ7 327 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 CDHR1Q96JP9 859 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 CAPNS2Q96L46 248 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 PSMD1Q99460 953 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 IKZF5Q9H5V7 419 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 NT5DC2Q9H857 520 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 ELL3Q9HB65 397 aaPredicted RBP1.27□□□□□ -2.21
SMG1-212ENST00000566328 PHPT1Q9NRX4 125 aaPredicted RBP1.27□□□□□ -2.21
SMG1-212ENST00000566328 HYPKQ9NX55 129 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 CWC25Q9NXE8 425 aaPredicted RBP1.27□□□□□ -2.21
SMG1-212ENST00000566328 CCPG1Q9ULG6 757 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 DOCK3Q8IZD9 2030 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 MUC3AQ02505 3323 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 SCN9AQ15858 1988 aa1.27□□□□□ -2.21
SMG1-212ENST00000566328 TRIOO75962 3097 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 C4AP0C0L4 1744 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 COL5A3P25940 1745 aaPredicted RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 TJP1Q07157 1748 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 KIAA1551Q9HCM1 1747 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 DNAH14Q0VDD8 3507 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 MRC1P22897 1456 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 PASKQ96RG2 1323 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 FANCIQ9NVI1 1328 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 RNF212BA8MTL3 300 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 ZNF724A8MTY0 619 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 ANHXE9PGG2 379 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 NEDD8-MDP1E9PL57 170 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 NPIPA3F8WFD2 350 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 MLNRO43193 412 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 DOK2O60496 412 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 DUSP14O95147 198 aaKnown RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 HSPB1P04792 205 aaKnown RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 PCCAP05165 728 aaPredicted RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 PSMB1P20618 241 aaKnown RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 AZGP1P25311 298 aaKnown RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 EIF2DP41214 584 aaKnown RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 RBPJQ06330 500 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 TCP10Q12799 353 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 IL11RAQ14626 422 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 WTAPQ15007 396 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 MICAQ29983 383 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 SHROOM1Q2M3G4 852 aaPredicted RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 FAM174BQ3ZCQ3 159 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 CCDC152Q4G0S7 254 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 PARP10Q53GL7 1025 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 C6orf136Q5SQH8 315 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 NEPROQ6NW34 567 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 ENPP7Q6UWV6 458 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 USP50Q70EL3 339 aaPredicted RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 CERS3Q8IU89 383 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 SLC43A2Q8N370 569 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 ANKRD13CQ8N6S4 541 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 CCDC191Q8NCU4 936 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 C8orf46Q8TAG6 207 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 DCPSQ96C86 337 aaKnown RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 KIR2DL4Q99706 377 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 TREX2Q9BQ50 279 aaPredicted RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 CHRDL1Q9BU40 450 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 TDRD3Q9H7E2 651 aaKnown RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 NTN4Q9HB63 628 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 CD209Q9NNX6 404 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 HAUS2Q9NVX0 235 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 SPG21Q9NZD8 308 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 RCOR3Q9P2K3 495 aaPredicted RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 CRCT1Q9UGL9 99 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 NEU3Q9UQ49 428 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 TMEM5Q9Y2B1 443 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 BRCA1P38398 1863 aaKnown RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 FER1L6Q2WGJ9 1857 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 SIPA1L3O60292 1781 aaPredicted RBP1.26□□□□□ -2.21
SMG1-212ENST00000566328 LTBP1Q14766 1721 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 COL24A1Q17RW2 1714 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms