RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 UCN3Q969E3 161 aa12.26□□□□□ -0.45
HACD3-208ENST00000566239 C16orf45Q96MC5 204 aaPredicted RBP12.26□□□□□ -0.45
HACD3-208ENST00000566239 SECISBP2Q96T21 854 aaKnown RBP12.26□□□□□ -0.45
HACD3-208ENST00000566239 FMO2Q99518 471 aa12.26□□□□□ -0.45
HACD3-208ENST00000566239 MRPL57Q9BQC6 102 aaKnown RBP12.26□□□□□ -0.45
HACD3-208ENST00000566239 MRPL1Q9BYD6 325 aaKnown RBP12.26□□□□□ -0.45
HACD3-208ENST00000566239 MRPL46Q9H2W6 279 aaKnown RBP12.26□□□□□ -0.45
HACD3-208ENST00000566239 PROK2Q9HC23 129 aa12.26□□□□□ -0.45
HACD3-208ENST00000566239 NMRK1Q9NWW6 199 aa12.26□□□□□ -0.45
HACD3-208ENST00000566239 SPRR3Q9UBC9 169 aa12.26□□□□□ -0.45
HACD3-208ENST00000566239 Q9UFV3 132 aa12.26□□□□□ -0.45
HACD3-208ENST00000566239 SNX6Q9UNH7 406 aa12.26□□□□□ -0.45
HACD3-208ENST00000566239 CSMD2Q7Z408 3487 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 ADGRG4Q8IZF6 3080 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 C1orf226A1L170 272 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 HSPB2A8KAH6 182 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 SNX4O95219 450 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 LRATO95237 230 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 CPMP14384 443 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 PORP16435 677 aaPredicted RBP12.25□□□□□ -0.45
HACD3-208ENST00000566239 KRT15P19012 456 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 MASP1P48740 699 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 FUT7Q11130 342 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 HSPB2Q16082 182 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 SGO1Q5FBB7 561 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 UBAP2Q5T6F2 1119 aaKnown RBP12.25□□□□□ -0.45
HACD3-208ENST00000566239 RIPPLY2Q5TAB7 128 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 PACS2Q86VP3 889 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 METTL4Q8N3J2 472 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 MMGT1Q8N4V1 131 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 ZNF615Q8N8J6 731 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 MNS1Q8NEH6 495 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 C17orf47Q8NEP4 570 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 SPPL2AQ8TCT8 520 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 LRRC46Q96FV0 321 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 NSUN5Q96P11 429 aaKnown RBP12.25□□□□□ -0.45
HACD3-208ENST00000566239 SLC6A15Q9H2J7 730 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 BRF2Q9HAW0 419 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 ZBTB26Q9HCK0 441 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 ZNF180Q9UJW8 692 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 PSME2Q9UL46 239 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 SLC12A4Q9UP95 1085 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 CFL2Q9Y281 166 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 MED13LQ71F56 2210 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 POLQO75417 2590 aa12.25□□□□□ -0.45
HACD3-208ENST00000566239 A0A087WUV0 522 aaPredicted RBP12.24□□□□□ -0.45
HACD3-208ENST00000566239 C15orf38-AP3S2A0A0A6YYH1 394 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 A0A1W2PS29 197 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 AHRRA9YTQ3 701 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 TRIM49D1C9J1S8 452 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 CDH16O75309 829 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 TRIM3O75382 744 aaPredicted RBP12.24□□□□□ -0.45
HACD3-208ENST00000566239 TRAPPC6AO75865 159 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 ZWINTO95229 277 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 RPS17P08708 135 aaKnown RBP12.24□□□□□ -0.45
HACD3-208ENST00000566239 CT62P0C5K7 136 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 CSNK2A2P19784 350 aaPredicted RBP12.24□□□□□ -0.45
HACD3-208ENST00000566239 ADH7P40394 386 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 PEX19P40855 299 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 TRPC1P48995 793 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 FBXW4P57775 412 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 DUSP8Q13202 625 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 SF3B4Q15427 424 aaKnown RBP eCLIP12.24□□□□□ -0.45
HACD3-208ENST00000566239 LGSNQ5TDP6 509 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 SLC48A1Q6P1K1 146 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 TMEM64Q6YI46 380 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 COMMD6Q7Z4G1 85 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 WDR53Q7Z5U6 358 aaPredicted RBP12.24□□□□□ -0.45
HACD3-208ENST00000566239 PM20D2Q8IYS1 436 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 ULK2Q8IYT8 1036 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 VWA5B2Q8N398 1253 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 SELENOMQ8WWX9 145 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 ADIPOR1Q96A54 375 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 RILPQ96NA2 401 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 ANGPTL4Q9BY76 406 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 BRINP2Q9C0B6 783 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 TRPS1Q9UHF7 1281 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 DMGDHQ9UI17 866 aaKnown RBP12.24□□□□□ -0.45
HACD3-208ENST00000566239 PCDHA9Q9Y5H5 950 aa12.24□□□□□ -0.45
HACD3-208ENST00000566239 DOCK7Q96N67 2140 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 TEP1Q99973 2627 aaKnown RBP12.23□□□□□ -0.45
HACD3-208ENST00000566239 ERAL1O75616 437 aaKnown RBP12.23□□□□□ -0.45
HACD3-208ENST00000566239 PDYNP01213 254 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 ATP1B1P05026 303 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 SNRPAP09012 282 aaKnown RBP12.23□□□□□ -0.45
HACD3-208ENST00000566239 NAGAP17050 411 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 TAC1P20366 129 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 GPX3P22352 226 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 ABCD3P28288 659 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 TOMM20Q15388 145 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 GLE1Q53GS7 698 aaKnown RBP12.23□□□□□ -0.45
HACD3-208ENST00000566239 TEX35Q5T0J7 233 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 LIX1LQ8IVB5 337 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 ZNF483Q8TF39 744 aaPredicted RBP12.23□□□□□ -0.45
HACD3-208ENST00000566239 DCAKDQ8WVC6 231 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 ZNF592Q92610 1267 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 KLHL29Q96CT2 875 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 FAIM2Q9BWQ8 316 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 C1QTNF3Q9BXJ4 246 aa12.23□□□□□ -0.45
HACD3-208ENST00000566239 FARSBQ9NSD9 589 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms